updated 20 days ago by
dimpleadiwal050896
•
0
•
written 5.0 years ago by
ggman
▴
90
1
vote
6
replies
2.8k
views
1
vote
1
reply
199
views
updated 2 days ago by
Nyksubuz
▴
20
•
written 3 days ago by
mirwa.zidi93
•
0
1
vote
2
replies
288
views
1
vote
3
replies
2.5k
views
updated 26 days ago by
chrchang523
10k
•
written 6.2 years ago by
Ginevra
▴
10
1
vote
3
replies
298
views
updated 16 days ago by
barslmn
★
2.2k
•
written 17 days ago by
poordumbsillyidiot
•
0
1
vote
1
reply
149
views
updated 5 days ago by
Ram
43k
•
written 5 days ago by
kilcdincer
▴
10
1
vote
0
replies
176
views
1
vote
2
replies
294
views
17 days ago by
rianna.collins
•
0
1
vote
3
replies
345
views
14 days ago by
Lada
▴
30
1
vote
2
replies
364
views
updated 6 days ago by
Ram
43k
•
written 7 days ago by
t.fortunato.asquini
•
0
1
vote
2
replies
283
views
updated 27 days ago by
Gordon Smyth
★
7.2k
•
written 5 weeks ago by
Netanel
•
0
1
vote
2
replies
325
views
1
vote
4
replies
353
views
1
vote
4
replies
506
views
1
vote
0
replies
143
views
1
vote
2
replies
258
views
1
vote
16
replies
741
views
updated 1 day ago by
GenoMax
142k
•
written 4 days ago by
hophuquy0944
•
0
1
vote
6
replies
418
views
1
vote
0
replies
178
views
1
vote
3
replies
341
views
25 days ago by
Art1ess
•
0
1
vote
2
replies
207
views
1
vote
1
reply
187
views
1
vote
0
replies
99
views
1
vote
3
replies
384
views
1
vote
3
replies
331
views
1
vote
1
reply
217
views
1
vote
2
replies
284
views
24 days ago by
ahmad.sajad4541
•
0
1
vote
8
replies
559
views
19 days ago by
marco.barr
▴
130
1
vote
2
replies
231
views
0
votes
0
replies
150
views
19 days ago by
Jacob
•
0
0
votes
2
replies
236
views
0
votes
0
replies
116
views
0
votes
5
replies
329
views
6 days ago by
SilhouetteQ
•
0
0
votes
1
reply
93
views
0
votes
0
replies
93
views
27 days ago by
sativus
▴
20
0
votes
0
replies
184
views
0
votes
4
replies
283
views
1 day ago by
mavy
▴
10
0
votes
0
replies
110
views
11 days ago by
kyj222637
•
0
0
votes
0
replies
29
views
2 hours ago by
Hasan_Daaboul
•
0
0
votes
1
reply
100
views
0
votes
0
replies
331
views
0
votes
0
replies
129
views
11 days ago by
Omics data mining
▴
260
0
votes
1
reply
150
views
0
votes
0
replies
113
views
updated 13 days ago by
Ram
43k
•
written 13 days ago by
arshad1292
▴
100
0
votes
0
replies
165
views
9 days ago by
RT
▴
10
0
votes
6
replies
493
views
0
votes
0
replies
97
views
4 days ago by
brunofelicianodeomena
•
0
0
votes
1
reply
169
views
0
votes
4
replies
263
views
0
votes
1
reply
250
views
updated 13 days ago by
marco.barr
▴
130
•
written 15 days ago by
Natali
•
0
Recent Votes
Recent Locations •
All
United States, 4 minutes ago
Oviedo, 4 minutes ago
India, 5 minutes ago
Pakistan, 6 minutes ago
United Kingdom, 7 minutes ago
France/Nantes/Institut du Thorax - INSERM UMR1087, 9 minutes ago
France, 12 minutes ago
Recent Awards •
All
Scholar to
Pierre Lindenbaum
161k
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
scideas
▴
30
Popular Question to
Muhammad
•
0
Popular Question to
synat.keam
▴
100
Recent Replies
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
Pierre Lindenbaum
161k
> Cannot read non-existent file: file:///local/home/User/VCF_Filtering/biostar.code
your file doesn't exist, is at the wrong place etc.
Comment: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
ajbarrett98
•
0
Hi Pierre,
I am attempting to run this code and am running into this error:
(jvar) $ jvarkit vcffilterjdk -f biostar.code Dart_VCF2_Or…
Comment: scRNA-seq data trained model can be used for predictions on bulk RNA-seq data?
by
ATpoint
82k
I cannot give a precise answer, as ML is not my field, but generally, why don't you apply the method to pseudobulks of the exact single-cel…
Answer: geom_bar issue in ggplot2 with xlim()
by
ATpoint
82k
https://stackoverflow.com/questions/10365167/geom-bar-bars-not-displaying-when-specifying-ylim
Comment: What marks a De-Novo Genome assembly as FAILED?
by
Umer
▴
50
Yes. We are sequencing 45 different samples with illumina.
12 of these are also going to be sequenced with Nanopore (for hybrid assembly). …
Comment: HGVS Nomenclature of Multiple Indels found in Cis
by
LauferVA
4.2k
how has this code progressed? is it publically available? would you want to work together?
Comment: Design for complex RNA-Seq experiment using Deseq2
by
Ezequiel
•
0
I completely agree with most points. The PCA shows that the biggest driver of difference is the patients themselves, with PRE and POST time…
Comment: Add stats to the plot
by
marco.barr
▴
130
Hi, you can add statistical annotations using `ggpubr` function `stat_pvalue_manual `. You need to make sure you calculate the p-values fir…
Answer: seqtk subseq in.fastq list.txt > out.fastq not extracting full sequence from
by
ATpoint
82k
Use everything before the whitespace in list.txt, for example `A00869:294:HCW57DSXY:2:1101:3929:1000` and not `A00869:294:HCW57DSXY:2:1101:…
Answer: CellRanger output more cells than specified using --force-cells? Why?
by
scideas
▴
30
I actually had this same issue with CellRanger v7- turns out that since you have 2 species in your mapping reference, CellRanger is forcing…
Answer: Checking chromosome builds for genotyping data
by
Muhammad
•
0
Assume you have genotype data in Plink format. (G.bed, G.bim, G.fam)
Download some reference panel data in Plink format (R.bed, R.bim, R.f…
Comment: Error in CIBERSORTx ($ operator is invalid for atomic vectors)
by
nguyenn6
•
0
did you ever figure it out? i'm having the same issue.
Comment: Traveler with Infernal mapping failed
by
anton.i.petrov
•
0
Hi Larissa! I am the lead developer of R2DT and I've just noticed this question. Could you please email help@r2dt.bio with your input seque…
Comment: constructing pangenome through psvcp
by
analyst
▴
50
Fixed the issue by updating nucmer version.
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
GenoMax
142k
Can you create a small test database (`makeblastdb`) from your query file and try to run the search against the same file and see if that w…
Traffic: 1319 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6