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1,000 results • Page
2 of 20
Sort: Rank
Rank
Views
Votes
Replies
3
votes
3
replies
964
views
Forum:
Importance of Data Structures for Bioinformatics?
data-structures
updated 8 months ago by
Ram
44k • written 8 months ago by
S
• 0
19
votes
15
replies
2.3k
views
Forum:
What is the amount of sequencing data produced annually?
data
research
sequencing
updated 1 day ago by
Mohamed
• 0 • written 8 months ago by
vincenthus
▴ 70
19
votes
10
replies
1.6k
views
Forum:
Pain points using commercial clouds
gpt
tinybio
updated 8 months ago by
vincenthus
▴ 70 • written 8 months ago by
Sasha
▴ 850
9
votes
6
replies
2.0k
views
6 follow
Forum:
GTF files from Ensembl Releases 105 and 106 unsorted
Ensembl
bug
GTF
updated 8 months ago by
ATpoint
82k • written 18 months ago by
dlaehnemann
▴ 30
3
votes
2
replies
653
views
Forum:
How to contribute to the next edition of Biostars Handbook
handbook
updated 8 months ago by
Ram
44k • written 8 months ago by
Fouad
▴ 20
3
votes
6
replies
1.5k
views
6 follow
Forum:
Is Bioinformatics a Professional Degree?
career
degree
8 months ago by
anasjamshed
▴ 120
2
votes
5
replies
983
views
6 follow
Forum:
Biostar as a next generation version
meta
mobile-app
updated 7 months ago by
Ram
44k • written 8 months ago by
rj.rezwan
• 0
2
votes
9
replies
1.2k
views
Forum:
open source projects looking for contributors
open-source
updated 8 months ago by
vincenthus
▴ 70 • written 8 months ago by
claudiofr
▴ 20
0
votes
0
replies
553
views
Forum:
Recruiters: what do you expect on a junior bioinformatician?
career
skills
updated 9 months ago by
Ram
44k • written 9 months ago by
gallardodiazmiriam
▴ 20
3
votes
4
replies
1.4k
views
Forum:
Discussion: Uploading terabytes of data to NCBI SRA
NCBI
WGS
archiving
servers
remote
updated 9 months ago by
GenoMax
142k • written 9 months ago by
James Reeve
▴ 130
0
votes
0
replies
593
views
Forum:
I have a Master's and little experience in Bioinformatics - what would be the next best step?
career
updated 9 months ago by
Ram
44k • written 9 months ago by
RM123
▴ 10
1
vote
3
replies
810
views
Forum:
Spaceranger missing spatial coordinates [Discussion]
Visium
updated 9 months ago by
GenoMax
142k • written 9 months ago by
morovatunc
▴ 550
11
votes
8
replies
1.5k
views
6 follow
Forum:
How to write a review article in bioinformatics
article
review
updated 8 months ago by
Ram
44k • written 9 months ago by
joey
▴ 10
365
votes
58
replies
70k
views
44 follow
Forum:
Recommend Your Favorite Bioinformatics Books
education
books
updated 7 months ago by
Ram
44k • written 14.2 years ago by
Istvan Albert
100k
1
vote
2
replies
18k
views
Forum:
Would you rather analyze a dataset with a strong, non-collinear batch effect, or a weak, collinear batch effect.
collinear
latent
batch-effect
variable
GLM
10 months ago by
LauferVA
4.2k
0
votes
3
replies
3.9k
views
10 follow
Forum:
Discussion question: Cutoff for SNP phylogeny
Phylogenetics
SNP
written 17 months ago by
SushiRoll
▴ 120
2
votes
3
replies
827
views
Forum:
Purely analytic or in silico manuscripts that have significantly improved biological understanding
dry-lab
updated 10 months ago by
GenoMax
142k • written 10 months ago by
LauferVA
4.2k
0
votes
2
replies
1.3k
views
Forum:
[Detailed Question] How to Normalize of Metagenomics Gene Abundances (with HMMs models)
normalization
updated 11 months ago by
Asaf
10k • written 11 months ago by
Davide
• 0
33
votes
23
replies
4.3k
views
8 follow
Forum:
Is there a file format better suited for the era of pangenomics than the .vcf? What are its attributes?
VCF
file-format
genomics
updated 11 months ago by
Jeremy Leipzig
22k • written 11 months ago by
LauferVA
4.2k
7
votes
8
replies
2.0k
views
Forum:
Would solving many Rosalind problems show your ability for this field in job-wise?
rosalind
career
11 months ago by
K
• 0
2
votes
3
replies
889
views
Forum:
Mapping a predicted sequence to a genome
predicted
map
alignment
sequence
updated 11 months ago by
Mensur Dlakic
★ 27k • written 11 months ago by
Andy
• 0
0
votes
0
replies
462
views
Forum:
Recommendation sought for differential exon usage of a single gene
splicing
differential-exon-usage
updated 11 months ago by
Ram
44k • written 11 months ago by
nick_b55
▴ 10
7
votes
4
replies
1.1k
views
Forum:
[Meta] Use of AI
AI
Artificial-Intelligence
meta
ChatGPT
updated 11 months ago by
Ram
44k • written 11 months ago by
LauferVA
4.2k
2
votes
2
replies
625
views
Forum:
Colleges
Colleges
india
universities
updated 11 months ago by
Ram
44k • written 11 months ago by
mahimanepalli36
• 0
19
votes
15
replies
2.1k
views
6 follow
Forum:
Cross out line in Biostars
meta
updated 12 months ago by
Ram
44k • written 6.0 years ago by
Bastien Hervé
5.3k
121
votes
33
replies
39k
views
24 follow
Forum:
Where To Look For Quality Bioinformatics Short Courses And Workshops?
Courses
updated 12 months ago by
carlopecoraro2
★ 2.5k • written 10.7 years ago by
Eric Normandeau
11k
103
votes
42
replies
31k
views
34 follow
Forum:
List of cloud genomics companies
cloud-genomics
updated 6 weeks ago by
Jeremy Leipzig
22k • written 10.5 years ago by
14134125465346445
★ 3.6k
26
votes
12
replies
7.5k
views
6 follow
Forum:
Mapping God Found ‘Scientifically Dishonest’ By Anonymous Peer Reviewers
ngs
updated 12 months ago by
zyan2005
▴ 10 • written 10.6 years ago by
johnblue81
▴ 50
0
votes
2
replies
793
views
Forum:
How to start in bioinformatics?
career
updated 12 months ago by
Ram
44k • written 13 months ago by
caffrey
• 0
4
votes
5
replies
1.4k
views
Forum:
I'm looking for a mentor in Bioinformatics
mentor
teaching
updated 3 months ago by
alva
• 0 • written 13 months ago by
cwaingartentrabajo
• 0
12
votes
5
replies
2.1k
views
6 follow
Forum:
Bioinformatics opportunities in Europe?
career
updated 13 months ago by
alwayshope
▴ 40 • written 13 months ago by
melaniem
• 0
19
votes
14
replies
2.1k
views
7 follow
Forum:
What's the general view on point & click bioinformatics for routine analyses?
ngs
RNA-Seq
next-gen-sequencing
13 months ago by
Simon
▴ 40
0
votes
0
replies
7.0k
views
Forum:
Optimal approach for variant calling with 3 diluted germline sample in one sequencing - Capture Sequencing
germline
Calling
Variant
Capture
Sequencing
13 months ago by
Alexandre Eeckhoutte
• 0
11
votes
11
replies
1.9k
views
7 follow
Forum:
Any tips in landing a bioinformatic job?
Spain
R
updated 13 months ago by
LauferVA
4.2k • written 14 months ago by
Jorge
▴ 30
4
votes
2
replies
720
views
Forum:
advice on course selection for a bioinformatics career.
career
updated 14 months ago by
Istvan Albert
100k • written 14 months ago by
Aaron
• 0
0
votes
1
reply
552
views
Forum:
Graduate in molecular biology and genetics
biology
genetics
Molecular
updated 14 months ago by
GenoMax
142k • written 14 months ago by
zamzammahmud20
• 0
4
votes
1
reply
805
views
Forum:
Open problems in genomics 2023
genomics
pangenomics
updated 14 months ago by
GenoMax
142k • written 14 months ago by
colindaven
6.4k
5
votes
3
replies
967
views
Forum:
Someone posted the same question to StackOverflow and Biostars. The results will blow your mind.
meta
updated 14 months ago by
Joe
21k • written 14 months ago by
Cornelius
▴ 70
1
vote
0
replies
488
views
Forum:
Penetrance versus heritability
penetrance
heritability
14 months ago by
tacrolimus
▴ 140
10
votes
15
replies
2.2k
views
Forum:
How should reference genome fasta files be distributed by UCSC?
reference-genome
fasta
freeze
ucsc-genome-browser
updated 11 months ago by
Jeremy Leipzig
22k • written 15 months ago by
Maximilian Haeussler
★ 1.6k
8
votes
4
replies
1.0k
views
Forum:
Implementing FAIR data principles to a bioinformatics lab
data
updated 15 months ago by
Jeremy Leipzig
22k • written 15 months ago by
pixie@bioinfo
★ 1.5k
0
votes
0
replies
472
views
Forum:
NGSrich - hg38
Coverage
NGSrich
15 months ago by
RK
• 0
5
votes
5
replies
2.3k
views
Forum:
Bioinformatics - how to start?
molecular-biology
updated 15 months ago by
Mensur Dlakic
★ 27k • written 15 months ago by
Abigail
• 0
8
votes
8
replies
1.8k
views
7 follow
Forum:
A Computer Scientist who wants to start Bioinformatics
computer-science
books
resources
ngs
updated 15 months ago by
omaridris5315
▴ 10 • written 17 months ago by
bjorn
• 0
7
votes
3
replies
1.1k
views
Forum:
Find a research paper for reproducing the results
research
paper
updated 16 months ago by
GenoMax
142k • written 16 months ago by
grant.hovhannisyan
★ 2.6k
1
vote
1
reply
809
views
Forum:
Gene ontology vs Gene set enrichment
set
enrichment
GSEA
ontology
Gene
analysis
gene
updated 17 months ago by
DareDevil
★ 4.3k • written 17 months ago by
Emmykyz
• 0
6
votes
12
replies
2.3k
views
Forum:
How to decide when to have local hardware vs cloud computing?
hardware
computational-resources
cloud
17 months ago by
Lluís R.
★ 1.2k
15
votes
11
replies
2.8k
views
7 follow
Forum:
BioStars and ChatGPT
ChatGPT
Meta
GPT
updated 13 months ago by
ponganta
▴ 590 • written 17 months ago by
Jack Tierney
▴ 360
18
votes
10
replies
2.5k
views
7 follow
Forum:
Add artificial intelligence training related disclaimers to your profile
licensing
AI
updated 17 months ago by
Michael
54k • written 17 months ago by
Istvan Albert
100k
7
votes
2
replies
926
views
Forum:
Improvement of Wikipedia articles with bioinformatic subjects
Wikipedia
Bioinformatics
16 months ago by
Matthias Zepper
4.6k
1,000 results • Page
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Recent Votes
Comment: scRNA-seq quality control
Comment: How to get the ratio of allele counts from GATK derived VCF file?
Setting up Aspera Connect (ascp) on Linux and macOS
Setting up Aspera Connect (ascp) on Linux and macOS
Answer: Genes' fpkm values through cufflink
Answer: Genes' fpkm values through cufflink
Genes' fpkm values through cufflink
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Comment: Z score
by
Akash D
▴ 40
Ok. However, if i perform it on log2FC, there wont be any control samples visible in my heatmap. Your answer is perfect.
Comment: Z score
by
ATpoint
82k
You can apply Z-scores on whatever you want, but it must make sense and depends on what you want to do. What is the context? See for exampl…
Answer: Z score in RNAseq
by
Akash D
▴ 40
Can Z score be applied on log2FC and then visualized? Alternatively, Can log2FC be converted to Z scores and then visualized as heatmap?
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
by
ATpoint
82k
Just for comparison, I deal with scRNA-seq daily and my workstation is a 12700k i7 with 128GB RAM and even this is actually more than I nee…
Answer: Ideal PC configurations and operating system for bioinformatics laboratory
by
colindaven
6.4k
- As others have said, 1-2 workstations are probably the way to go. - A Linux OS like Ubuntu is probably easiest and has best docs - RA…
Comment: How to get the ratio of allele counts from GATK derived VCF file?
by
anikcropscience
▴ 230
Ok, thank you for the reply. I will check out the DP field then.
Comment: Alternatives To Liftover
by
Thanujay S
• 0
Hey! Would you consider building an API for the same? Is that something you have planned?
Answer: Ideal PC configurations and operating system for bioinformatics laboratory
by
emmanouil.a
▴ 120
20k are good money for some workstations ... probably you need to run more samples at the same time ... for some 1000s you could take a wor…
Comment: samtools write-index
by
LucisTheFather
• 0
``` -o alignment.sorted.bam##idx##alignment.sorted.bam.bai ``` This portion is to get .bai index, instead of .csi indexing. Although Idk th…
Comment: samtools write-index
by
LucisTheFather
• 0
Really appreciate your help Pierre! I am a little bit confused btw. do you mean this: ``` rm -vf alignment.sorted.bam.bai minimap2 -ax map-…
Comment: samtools write-index
by
LucisTheFather
• 0
Yeah, I did multiple split tests of my pipeline (just subset 400k rows of my fastq and run through my pipeline for quick tests) and none of…
Comment: Which 1000 genomes 30x files should I use for imputation?
by
David-walson
• 0
Hi there. Have you found any suggestions? I have alos been working on the 1KGP high coverage data, but i have no idea about how to use it p…
Comment: MAUVE: No gene annotations in Genbank file alignments
by
pramach1
▴ 40
The same problem persists for me too. Running progressiveMauve on command line on bunch of gbk files. Mauve itself runs fine and I do see t…
Answer: Error when looping over multiple columns in a data frame in R
by
Jeremy
▴ 910
First of all, you should use "tag.healthy" and "methods" instead of "tag.health" and "method". Also, optimal.cutpoints() wants X to be eit…
Comment: Mouse or Rat Gene Expression Data Similar to GTEx
by
GenoMax
142k
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