utilities in vienna-rna package
Is anybody aware of the usage of vienna-rna package? I am trying to use a utility provided by the package to convert .ct structure format of RNA secondary structure into vienna dot bracket format but i am unable to use it. i type the command as given by the tutorial i.e.
ct2b.pl filename.ct > output.struct
but it gives me the error command not found
I have also tried
perl ct2b.pl filename.ct > output.struct
and
perldoc ct2b.pl filename.ct > output.struct
but it still gives the error. can somebody help?
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Hello fareehakanwal90!
We believe that this post does not fit the main topic of this site.
it's a basic linux question: http://www.cyberciti.biz/faq/linux-unix-command-not-found-error-and-how-to-get-rid-of-it/
For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.
If you disagree please tell us why in a reply below, we'll be happy to talk about it.
Cheers!
I agree that this question is not specific to bioinformatics, but before you give up, just to give a hint, most likely you don't have Perl installed!