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Saad Khan
Saad Khan
Reputation:
440
Joined:
15.2 years ago
Last seen:
2.5 years ago
Location:
United States
Latest posts by user
0 votes
0 replies
619 views
RNA secondary structure for GRCH38 transcriptome
dot-bracket-notation human rna-secondary-structure grch38
written by Saad Khan Saad Khan
1 vote
2 replies
1.4K views
Transcript feature coverage with coverage of each feature shown like e.g. UTR's CDS, exons etc
rseqc
updated by Huiyang • Huiyang • written by Saad Khan Saad Khan
0 votes
0 replies
1.3K views
Is it possible to introduce mutations (SNV/Indels) in precomputed lastz alignments
fastaalternatereferencemaker lastz pairwise_align
written by Saad Khan Saad Khan
0 votes
0 replies
0 views
Comment: C: Merging variant calls of whole exome and RNA-seq
written by Saad Khan Saad Khan
0 votes
2 replies
1.9K views
Merging variant calls of whole exome and RNA-seq
gatk rna-seq variants indels snvs
updated by Omics data mining Omics data mining • written by Saad Khan Saad Khan
0 votes
2 replies
1 view
Comment: C: Negative dataset selection
written by Saad Khan Saad Khan
0 votes
4 replies
2.4K views
Negative dataset selection
machine-learning sequence classification rna dna
written by Saad Khan Saad Khan
0 votes
1 reply
2.0K views
Which tool to use to get all citations of a pmid paper?
entrez eutils efetch
updated by h.mon h.mon • written by Saad Khan Saad Khan
0 votes
0 replies
1.3K views
Tool for generating Physicochemical properties from sequence of RNA/DNA
mrna dna sequence physicochemical properties
written by Saad Khan Saad Khan
0 votes
0 replies
27 views
Tool for generating Physicochemical properties from sequence of RNA/DNA
mrna dna sequence physicochemical properties
written by Saad Khan Saad Khan
0 votes
0 replies
1 view
Comment: C: Most genes with entrez id in KEGG database don't have a pathway assigned. Is the
written by Saad Khan Saad Khan
0 votes
3 replies
2.6K views
Most genes with entrez id in KEGG database don't have a pathway assigned. Is there a tool already available that uses textmining to assign pathway to genes.
kegg reactome keggrest
written by Saad Khan Saad Khan
0 votes
0 replies
0 views
Comment: C: Protein protein interaction conservation scores
written by Saad Khan Saad Khan
0 votes
2 replies
2.1K views
Protein protein interaction conservation scores
ppi conservation scores
written by Saad Khan Saad Khan
0 votes
1 reply
2.1K views
Cancer data for histone Chip-seq in human and mouse
cancer chip-seq histone geo sra
updated by Ben Ben • written by Saad Khan Saad Khan
0 votes
0 replies
2.0K views
What does mm10-minimal mean in encode files
metadata encode mm10-minimal
written by Saad Khan Saad Khan
0 votes
0 replies
0 views
Comment: C: Clustering using codon usage similarity
written by Saad Khan Saad Khan
0 votes
1 reply
4.3K views
How to do gene enrichment analysis using only GO-slim terma
go-slim gene enrichment
updated by EpiExplorer EpiExplorer • written by Saad Khan Saad Khan
1 vote
4 replies
3.1K views
Clustering using codon usage similarity
codon usage clustering
updated by Biostar Biostar • written by Saad Khan Saad Khan
0 votes
0 replies
1.6K views
Segment genes into functional subsets
gene ontology functions subsets
written by Saad Khan Saad Khan
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TODO: Awards