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0
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2
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1.4k
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Comment: Comment: Problem when generating hg38 genome indexes using STAR
2.4 years ago by Sara ▴ 260
0
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2
replies
1.4k
views
Comment: Comment: Problem when generating hg38 genome indexes using STAR
2.4 years ago by Sara ▴ 260
0
votes
6
replies
1.4k
views
Problem when generating hg38 genome indexes using STAR
STAR
updated 2.4 years ago by 82k • written 2.4 years ago by ▴ 260
0
votes
1
reply
2.2k
views
Comment: Comment: error when indexing transcroptome using salmon
2.4 years ago by Sara ▴ 260
0
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1
reply
2.2k
views
Comment: Comment: error when indexing transcroptome using salmon
2.4 years ago by Sara ▴ 260
0
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1
reply
2.2k
views
Comment: Comment: error when indexing transcroptome using salmon
2.4 years ago by Sara ▴ 260
3
votes
8
replies
2.2k
views
error when indexing transcroptome using salmon
Transcriptome salmon
updated 2.4 years ago by 6.6k • written 2.4 years ago by ▴ 260
0
votes
0
replies
394
views
detect the alternative contigs from the RNAseq data
alternative contigs
2.5 years ago by Sara ▴ 260
0
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1
reply
1.2k
views
Comment: Comment: obtaining unique identifier for a sample from fastq files
2.6 years ago by Sara ▴ 260
0
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4
replies
1.2k
views
obtaining unique identifier for a sample from fastq files
fastq
2.6 years ago by Sara ▴ 260
1
vote
1
reply
597
views
extract specific information from fastq and sam files
sequencing
updated 2.6 years ago by 142k • written 2.6 years ago by ▴ 260
4
votes
2
replies
1.0k
views
DNA to peptide translation and adding to csv file
translation
updated 2.7 years ago by 162k • written 2.7 years ago by ▴ 260
3
votes
3
replies
715
views
best tool for the pipeline wrapper
pipeline
updated 2.7 years ago by 100k • written 2.7 years ago by ▴ 260
0
votes
0
replies
2.5k
views
Comment: Comment: collapsing pacbio reads into a single sequence
2.8 years ago by Sara ▴ 260
0
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1
reply
2.5k
views
Comment: Comment: collapsing pacbio reads into a single sequence
2.8 years ago by Sara ▴ 260
2
votes
5
replies
2.5k
views
collapsing pacbio reads into a single sequence
pacbio
2.8 years ago by Sara ▴ 260
2
votes
2
replies
917
views
Available annotation file for the PacBio Iso-seq data
sequencing
updated 2.9 years ago by 142k • written 4.4 years ago by ▴ 260
3
votes
3
replies
1.2k
views
quick way of contamination identification from fastq file
alignment
updated 3.0 years ago by ★ 1.4k • written 3.0 years ago by ▴ 260
0
votes
1
reply
1.2k
views
Comment: Comment: problem with SNPs and Indels detectiong useng WGS data
3.1 years ago by Sara ▴ 260
1
vote
4
replies
1.2k
views
problem with SNPs and Indels detectiong useng WGS data
WGS
updated 3.1 years ago by 44k • written 3.1 years ago by ▴ 260
0
votes
0
replies
576
views
Comment: Comment: low alignment rate of methyl-seq data
3.3 years ago by Sara ▴ 260
1
vote
2
replies
576
views
low alignment rate of methyl-seq data
alignment
3.3 years ago by Sara ▴ 260
0
votes
0
replies
535
views
methylseq data analysis using bismark and low alignment rate
next-gen
3.4 years ago by Sara ▴ 260
4
votes
6
replies
2.1k
views
UMI and the reason of high duplicate rate
rna-seq
updated 3.6 years ago by 14k • written 3.6 years ago by ▴ 260
0
votes
2
replies
2.1k
views
Comment: A: UMI and the reason of high duplicate rate
3.6 years ago by Sara ▴ 260
1
vote
1
reply
765
views
compare expression for 1 gene between more than 2 samples
RNA-Seq
updated 3.6 years ago by • 0 • written 3.6 years ago by ▴ 260
5
votes
2
replies
5.7k
views
CIBERSORT input file format
RNA-Seq CIBERSORT
updated 3.7 years ago by ▴ 30 • written 4.1 years ago by ▴ 260
2
votes
2
replies
1.1k
views
correct order for pathway analysis
gene
3.7 years ago by Sara ▴ 260
1
vote
1
reply
1.4k
views
a lot of missing variants when using DRAGEN for variant calling
next-gen
3.7 years ago by Sara ▴ 260
0
votes
1
reply
1.9k
views
comparing 2 VCF files
SNP
3.7 years ago by Sara ▴ 260
0
votes
2
replies
831
views
building container in singularity
software error
3.8 years ago by Sara ▴ 260
3
votes
4
replies
2.3k
views
VCF evaluation using RTG.jar vcfeval
SNP
updated 3.8 years ago by ★ 1.6k • written 3.8 years ago by ▴ 260
1
vote
2
replies
873
views
missing file in rtg-tools
SNP
3.8 years ago by Sara ▴ 260
0
votes
2
replies
1.8k
views
difference between DRAGEN and GATK
genome
3.9 years ago by Sara ▴ 260
0
votes
0
replies
989
views
Comment: C: how can I find the download link for a famous dataset
3.9 years ago by Sara ▴ 260
0
votes
1
reply
989
views
Comment: C: how can I find the download link for a famous dataset
3.9 years ago by Sara ▴ 260
1
vote
4
replies
989
views
how can I find the download link for a famous dataset
sequencing
3.9 years ago by Sara ▴ 260
0
votes
2
replies
783
views
identifying the command for creating VCF file
SNP
updated 3.9 years ago by ★ 3.2k • written 3.9 years ago by ▴ 260
1
vote
0
replies
530
views
evaluate the quality of VCF files for CNVs
sequencing genome
updated 3.9 years ago by 162k • written 3.9 years ago by ▴ 260
0
votes
3
replies
2.2k
views
read count normalization for spike
RNA-Seq
updated 4.0 years ago by 20 • written 7.2 years ago by ▴ 260
1
vote
1
reply
1.5k
views
correct order of cut off and normalization in RNAseq data
RNA-Seq
updated 4.0 years ago by 82k • written 4.0 years ago by ▴ 260
0
votes
2
replies
530
views
legal issues about running the analysis on the cloud
next-gen
updated 4.2 years ago by 104k • written 4.2 years ago by ▴ 260
0
votes
2
replies
1.1k
views
tool for the new protocol of WES for CNV detection
next-gen
updated 4.2 years ago by ★ 2.9k • written 4.2 years ago by ▴ 260
3
votes
2
replies
792
views
uploading the files to the cloud
RNA-Seq
updated 4.2 years ago by 35k • written 4.2 years ago by ▴ 260
0
votes
5
replies
815
views
location of integrated vector in the genome in CRISPR experiment
genome
updated 4.3 years ago by 15k • written 4.3 years ago by ▴ 260
0
votes
0
replies
815
views
Comment: C: location of integrated vector in the genome in CRISPR experiment
4.3 years ago by Sara ▴ 260
0
votes
0
replies
815
views
Comment: C: location of integrated vector in the genome in CRISPR experiment
4.3 years ago by Sara ▴ 260
0
votes
1
reply
509
views
INDELs frequency at the on-target site in CRISPR experiment
genome
4.3 years ago by Sara ▴ 260
3
votes
3
replies
2.4k
views
create consensus sequence from bam file
alignment
4.3 years ago by Sara ▴ 260
0
votes
1
reply
2.4k
views
Comment: A: create consensus sequence from bam file
4.3 years ago by Sara ▴ 260
147 results • Page 2 of 3
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