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0 votes
2 replies
1.1K views
Weird Basecalled reads PHRED quality plot from pycoQC
pycoqc nanopore sequencing
written by njornet • njornet
0 votes
0 replies
669 views
computeGCBias outputs
gc bam deeptools gcbias
written by pablo pablo
0 votes
10 replies
2.9K views
Intersect gene IDs list and GFF3 to get the annotation.
annotation gff
written by Lissa Cruz Saavedra • Lissa Cruz Saavedra
0 votes
0 replies
614 views
Pindel zygosity determination
depth vaf pindel zygosity
written by arya.sagittarius • arya.sagittarius
0 votes
3 replies
1.4K views
How to predict the affinity between Protein and RNA?
protein-rnainteractions prediction deeplearning
updated by dthorbur dthorbur • written by Alex • Alex
0 votes
3 replies
2.7K views
Snakemake's SyntaxError positional argument follows keyword argument
snakemake
updated by dariober dariober • written by ema • ema
1 vote
2 replies
1.4K views
Seeking Help with Cell Ranger Multi Error in fixed-RNA-profiling
chromium fixed-rna-profiling cellranger
updated by naveau • naveau • written by luminea • luminea
0 votes
3 replies
1.1K views
ONT methylation data background noise
data noise
updated by colindaven colindaven • written by marco.barr • marco.barr
1 vote
8 replies
6.2K views
Create Conda Environment with YAML File
python
updated by dthorbur dthorbur • written by cthangav • cthangav
0 votes
3 replies
3.3K views
ChipQC doesn't run
chip-seq
updated by armando_c2 • armando_c2 • written by francesca3 • francesca3
1 vote
4 replies
3.1K views
gnomAD4.0 Hail Table Downloading
ngs gnomad
updated by DBScan • DBScan • written by adarsh • adarsh
0 votes
6 replies
1.4K views
Protein loops
protein loop
written by Curious • Curious
0 votes
8 replies
9.0K views
Download CAZy database
genome gene database cazy
updated by GenoMax GenoMax • written by anu014 anu014
54 votes
35 replies
25K views
Tutorial: Generating consensus sequence from bam file
fasta consensus bam
updated by Michael Dondrup Michael Dondrup • written by finswimmer finswimmer
0 votes
0 replies
939 views
Looking for guidance on Microbial Association Networks (MANs) Inference with samples from different metagenomics/metatranscriptomics studies
microbialassociationnetworks metatranscriptomics metagenomics netowrkbiology
written by sebasar1245 • sebasar1245
0 votes
1 reply
508 views
Bed file
bedfile
updated by Pierre Lindenbaum Pierre Lindenbaum • written by Jeet • Jeet
1 vote
1 reply
1.0K views
karyoploteR SNP density
snp vcf karyoploter
updated by Bastien Hervé Bastien Hervé • written by Kip • Kip
0 votes
0 replies
509 views
How can validate hub genes or significant factors using area under the ROC curve (AUC)?
r auc genes hub validation
written by wyt1995 • wyt1995
0 votes
0 replies
843 views
Toxinpred 3.0 tool
peptide protein toxin toxicity
updated by zx8754 zx8754 • written by Saurabh • Saurabh
0 votes
1 reply
751 views
STAR --sjdbGTFfile in alignment step
star
updated by dsull dsull • written by malonzm1 • malonzm1
0 votes
3 replies
1.2K views
Microarray pbrobe ID to gene ID problem
microarray
updated by GenoMax GenoMax • written by mnx0723 • mnx0723
1 vote
1 reply
803 views
News: EMBL Course Hands-on course for sample preparation and data analysis in proteomics
emblproteomics
updated by dr.eldeib89 • dr.eldeib89 • written by EMBL Events EMBL Events
0 votes
2 replies
821 views
Pipelines/packages for protein domain annotation?
annotation protein domains
written by John • John
0 votes
0 replies
422 views
Polysome profiling data
polysome
updated by Ram Ram • written by Hasan_Daaboul • Hasan_Daaboul
0 votes
0 replies
808 views
Job: Project Scientist in Neurobiology at UC San Diego
ucsd biology lifescience highereducation
written by UCSDBioSci • UCSDBioSci
0 votes
0 replies
906 views
Job: Bioinformatics/Data Science postdoc position in Aarhus, Denmark
data-science genomics postdoc
updated by Ram Ram • written by besen • besen
0 votes
0 replies
1.0K views
Job: Bioinformatics Assistant Researcher - Metabarcoding - Honolulu, Hawaii
dna postdoc edna environmental metabarcoding
written by Jonathan • Jonathan
0 votes
0 replies
525 views
What to do with multiple genes in ballgown?
star ballgown deseq2
written by markusz • markusz
0 votes
9 replies
2.0K views
RNA_seq
rna-seq
updated by swbarnes2 swbarnes2 • written by daffodil • daffodil
0 votes
9 replies
2.0K views
miRNA alignment with Bowtie2
bowtie2
written by Chironex • Chironex
0 votes
2 replies
1.3K views
NanoPlot quality data
quality nanoplot
updated by Arton • Arton • written by Wagner Daniel • Wagner Daniel
0 votes
0 replies
904 views
Job: Bioanalysis Neuroimaging position
python machine-learning neuroscience
updated by Ram Ram • written by sivan.kinreich • sivan.kinreich
0 votes
2 replies
2.7K views
GENERAL R QUESTION: Accessing package versions of an old R object/project?
r seurat rstudio
updated by Ram Ram • written by Natalia • Natalia
0 votes
0 replies
552 views
Difference between reading concatenated PE reads into jellyfish and merging paired end .jf outputs independently
jellyfish kmer genomescope
written by joshua.j.wright • joshua.j.wright
0 votes
0 replies
589 views
ImmuCellAI
rstudio immucellai
updated by Ram Ram • written by sana • sana
0 votes
2 replies
985 views
Is there a program that can predict the sequence of an organisms telomeres just from raw sequencing reads
telomeres genomics sequencing
written by Mark • Mark
0 votes
4 replies
1.8K views
Seqkit Replace
seqkit fasta
updated by Ram Ram • written by pablo pablo
0 votes
1 reply
813 views
Calculating (Groupwise) Log2fold change using values obtained from SST-RMA?
sst-rma genes tac thermofisher foldchange
updated by ATpoint ATpoint • written by purple909 • purple909
0 votes
0 replies
489 views
Issue to run gatk4 spark
gatk spark
written by Mojtaba • Mojtaba
0 votes
5 replies
2.2K views
samtools mpileup taking too long
bam samtools sam alignment
updated by Ram Ram • written by K • K
0 votes
10 replies
2.4K views
Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
pangenome plants phg
updated by lcj34 lcj34 • written by b.contreras.moreira • b.contreras.moreira
0 votes
1 reply
678 views
SNP and Genes position matching dataframes in R
r dataframe
updated by dthorbur dthorbur • written by QX • QX
0 votes
1 reply
954 views
Alignment tool of repeat expansion detection
str ngs readexpansion
updated by Jesse • Jesse • written by adarsh • adarsh
0 votes
12 replies
7.6K views
How to speed-up to contruct phylogenetic tree
mega tree phylogenetic
updated by Joe Joe • written by Nelo • Nelo
0 votes
2 replies
1.2K views
Bed file filtering
bed
updated by marco.barr • marco.barr • written by kamila.temirkhanova • kamila.temirkhanova
0 votes
18 replies
3.0K views
Import list and assign distinct colors in R
r ggplot2
written by kmyers2 • kmyers2
1 vote
7 replies
2.3K views
Does removal of contaminants in RNAseq data have an impact on downstream analyses?
rna-seq contamination
updated by Chris Dean • Chris Dean • written by ev97 • ev97
0 votes
0 replies
697 views
HADDOCK 2.4
protein docking
written by Preeti • Preeti
0 votes
7 replies
2.1K views
java version compatible with GATK 3.2.2
gatk
written by shpak.max • shpak.max
2 votes
4 replies
1.8K views
Receptors with internalization capability
receptor
written by Shicheng Guo Shicheng Guo
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