updated 9 hours ago by
alanh
▴
170
•
written 7.1 years ago by
jonessara770
▴
240
38
votes
12
replies
31k
views
9 follow
6
votes
4
replies
277
views
4
votes
7
replies
442
views
updated 12 hours ago by
marco.barr
▴
130
•
written 2 days ago by
diqixiaoyaoer
▴
20
4
votes
9
replies
405
views
12 hours ago by
Gabriel R.
★
2.9k
3
votes
4
replies
274
views
2
votes
11
replies
656
views
1
vote
1
reply
152
views
updated 22 hours ago by
Nyksubuz
▴
20
•
written 1 day ago by
mirwa.zidi93
•
0
1
vote
14
replies
618
views
1
vote
5
replies
271
views
0
votes
4
replies
261
views
17 hours ago by
kilcdincer
▴
10
0
votes
0
replies
66
views
0
votes
1
reply
195
views
updated 15 hours ago by
GenoMax
142k
•
written 22 hours ago by
huxiangyulove
•
0
0
votes
1
reply
102
views
0
votes
3
replies
236
views
updated 18 hours ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
saifulislam99121
•
0
0
votes
0
replies
58
views
updated 12 hours ago by
GenoMax
142k
•
written 12 hours ago by
yura.grabovska
▴
90
0
votes
0
replies
67
views
0
votes
4
replies
268
views
0
votes
1
reply
141
views
0
votes
1
reply
153
views
0
votes
3
replies
207
views
updated 9 hours ago by
andres.firrincieli
3.6k
•
written 2 days ago by
mavy
▴
10
0
votes
0
replies
70
views
8 hours ago by
qudrat.nii
▴
10
0
votes
3
replies
177
views
0
votes
0
replies
46
views
6 hours ago by
kilcdincer
▴
10
0
votes
2
replies
119
views
0
votes
6
replies
218
views
0
votes
2
replies
99
views
0
votes
0
replies
38
views
0
votes
1
reply
81
views
0
votes
0
replies
30
views
updated 2 hours ago by
GenoMax
142k
•
written 3 hours ago by
marineandriot
•
0
0
votes
2
replies
172
views
updated 17 hours ago by
Pierre Lindenbaum
161k
•
written 23 hours ago by
melissachua90
▴
70
Recent Votes
Recent Locations •
All
United States, just now
EEUU, 6 minutes ago
China, 9 minutes ago
Portugal, 14 minutes ago
United States, 23 minutes ago
Japan, 25 minutes ago
CU Boulder, 1 hour ago
Recent Awards •
All
Popular Question to
finswimmer
16k
Popular Question to
Ezequiel
•
0
Popular Question to
alanh
▴
170
Popular Question to
ashkan
▴
160
Recent Replies
Comment: How to handle duplicated genes in TCGA data?
by
Ngrin
•
0
Thanks @txema.heredia.The tool I am going to use only accepts gene symbols. This is the reason. So I cannot use ENS IDs.
Answer: Design for complex RNA-Seq experiment using Deseq2
by
swbarnes2
14k
This is a rather small experiment, I don't know that you can establish a meaningful baseline for each patient with a single pre sample, and…
Comment: GG Sankey plot
by
LauferVA
4.2k
@bk11 i changed this comment to an answer. if you disagree please let me know. thanks for sharing your knowledge. VAL
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
Thanks for the input. Unfortunately, that didn't help either. I appreciate any other tips.
Thank you
Answer: GG Sankey plot
by
bk11
★
2.5k
You need to change your data table into a 'long' format. You can do something like this-
GOs_childs_recursive <- GOs_childs_recursive …
Answer: Trimming tool
by
ntsopoul
▴
60
I use Trim Galore which automatically recognizes adaptors.
https://github.com/FelixKrueger/TrimGalore
Here is the script I am using for…
Answer: Trimming tool
by
GenoMax
142k
There are plenty. `bbduk.sh` from BBMap suite (https://jgi.doe.gov/data-and-tools/software-tools/bbtools/bb-tools-user-guide/bbduk-guide/ )…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
bk11
★
2.5k
Please check out [in this link.][1]
[1]: https://github.com/jokergoo/ComplexHeatmap/issues/349
Comment: Reconstruction of locus, order contigs
by
dthorbur
★
2.0k
[Here](https://www.biostars.org/p/9544689/) is a forum post that may answer your question.
Comment: how to treat the replicates while performing WGCNA
by
andres.firrincieli
3.6k
> 1) I do not want to merge the MEs rather I asked about replicates, as
> some replicates of same sample are showing different behavior for…
Comment: How to systematically check if a bam file is truncated
by
alanh
▴
170
For more details about what `samtools quickcheck` actually checks for, add a few `-v`'s to the command line.
$ samtools quickcheck -…
Comment: How to handle duplicated genes in TCGA data?
by
Zhenyu Zhang
★
1.2k
Second what is said above, ensembl_id is the unique identifier.
As a good bioinformatics habit, always use unique identifier for your anal…
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
hannes.bongartz
•
0
It doesn't work. The annotation labels are still in a default fontsize. I cant find a way to set the fontsize.
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation
by
Ram
43k
Yes. The solution to most things with ComplexHeatmap is to play around with parameters.
Comment: Reconstruction of locus, order contigs
by
BATMAN
•
0
I do not want to re-annotate the genome. I ask if there is a way to extract the region aligned with the mauve, in .gbk format.
Traffic: 1736 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6