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questions
3
votes
4
replies
3.0k
views
Have you ever obtained user guide of ExomeCNV?
CNV
updated 4.4 years ago by
lffu_0032
▴ 90 • written 5.2 years ago by
oghzzang
▴ 50
5
votes
8
replies
656
views
Multiple threads on ubuntu server
Ubuntu
updated 4 months ago by
colindaven
6.4k • written 4 months ago by
oghzzang
▴ 50
8
votes
10
replies
1.1k
views
Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
Visium
RNA
3 months ago by
oghzzang
▴ 50
2
votes
2
replies
966
views
Can I aggregate visium data from different samples using harmony?
Visium
9 months ago by
oghzzang
▴ 50
4
votes
6
replies
906
views
** Short insert size in NGS ➞ clip overlap region???****
NGS
clipping
13 months ago by
oghzzang
▴ 50
2
votes
2
replies
1.1k
views
How to merge CNVs of 400 samples?
CNV
updated 3.5 years ago by
Pierre Lindenbaum
161k • written 3.5 years ago by
oghzzang
▴ 50
1
vote
1
reply
6.0k
views
XS tag in SAM file
XS
UQ
GATK4
updated 3.9 years ago by
finswimmer
16k • written 3.9 years ago by
oghzzang
▴ 50
3
votes
4
replies
962
views
Parse allele database
python
updated 5.0 years ago by
Ram
43k • written 5.0 years ago by
oghzzang
▴ 50
4
votes
8
replies
3.1k
views
ExAC non-TCGA mean
DNA
db
updated 5.1 years ago by
igor
13k • written 5.2 years ago by
oghzzang
▴ 50
0
votes
0
replies
1.1k
views
Can I use virus expression value from VirusSeq?
virus
rna-seq
5.7 years ago by
oghzzang
▴ 50
0
votes
0
replies
1.3k
views
Seq2HLA for detecting HLA type using RNA-seq
Seq2HLA
RNA-Seq
updated 5.8 years ago by
Biostar
20 • written 6.0 years ago by
oghzzang
▴ 50
0
votes
0
replies
861
views
Interpretation of ViralFusionSeq result
Virus Detect
RNA-seq
ViralFusionSeq
5.8 years ago by
oghzzang
▴ 50
1
vote
0
replies
1.9k
views
GATK4 BaseRecalibrator and Target region (whole exome data)
GATK4
BQSR
5.9 years ago by
oghzzang
▴ 50
8
votes
15
replies
3.5k
views
get identical number of read1 and read2 aligned
dna
fastq
5.9 years ago by
oghzzang
▴ 50
0
votes
0
replies
1.2k
views
HLA-VBseq for detecting HLA type using RNA-Seq inputs
HLA-VBseq
6.0 years ago by
oghzzang
▴ 50
0
votes
1
reply
2.0k
views
HLAminer RNA-seq vs Whole exome seq
RNA-Seq
HLAminer
HLA
WXS
6.0 years ago by
oghzzang
▴ 50
0
votes
6
replies
3.6k
views
Questions about bam to fastq
fastq
bam
samtools
updated 14 months ago by
Ram
43k • written 6.0 years ago by
oghzzang
▴ 50
7
votes
2
replies
3.0k
views
germline calling of tumor-normal paired sample germline by varscan2
varscan2
germline
tumor-normal
updated 6.0 years ago by
ATpoint
82k • written 6.0 years ago by
oghzzang
▴ 50
2
votes
5
replies
4.6k
views
I got extremely low alignment rate running HiSAT2 and Tophat2
RNA-Seq
MM10
alignment
updated 6.1 years ago by
Carlo Yague
8.7k • written 6.1 years ago by
oghzzang
▴ 50
1
vote
2
replies
1.2k
views
Differential Expression gene In Rna-Seq Experiment using mt.maxT
rna-seq
6.2 years ago by
oghzzang
▴ 50
0
votes
4
replies
1.9k
views
Differential Expression Gene analysis using normalized data
RNA-Seq
updated 2.2 years ago by
Friederike
8.9k • written 6.2 years ago by
oghzzang
▴ 50
1
vote
2
replies
1.5k
views
how to get Differentially expressed genes from TCGA normalized data.
rna-seq
updated 6.3 years ago by
Kevin Blighe
88k • written 6.3 years ago by
oghzzang
▴ 50
0
votes
0
replies
1.8k
views
How can I use PoN when running vardict?
vardict
panelofnormal
updated 6.5 years ago by
Biostar
20 • written 6.6 years ago by
oghzzang
▴ 50
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