User: fhsantanna

8

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10

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8.6k

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ani jspecies

updated 12 months ago by colindaven 6.4k • written 9.0 years ago by fhsantanna ▴ 610

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10

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7.8k

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edirect esearch while

updated 2.2 years ago by Michael 54k • written 7.5 years ago by fhsantanna ▴ 610

2

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1

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545

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seaborn python sars-cov-2 R

2.3 years ago by fhsantanna ▴ 610

2

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3

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863

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bam coinfection consensus ivar

2.8 years ago by fhsantanna ▴ 610

0

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3

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1.9k

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figtree ggtree R phylogenetics

3.1 years ago by fhsantanna ▴ 610

0

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0

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630

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nexus ape ggtree R python

3.1 years ago by fhsantanna ▴ 610

0

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0

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692

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sars-cov-2 subsample ram genome gisaid

3.2 years ago by fhsantanna ▴ 610

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5

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2.8k

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ivar trimming sars-cov-2

3.4 years ago by fhsantanna ▴ 610

3

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2

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1.3k

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machine learning phylogeny

written 4.8 years ago by fhsantanna ▴ 610

4

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6

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1.6k

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sars sars-cov-2 genome Assembly

updated 3.8 years ago by GenoMax 141k • written 3.8 years ago by fhsantanna ▴ 610

0

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0

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547

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hgt thermophiles bacteria genome plot

4.0 years ago by fhsantanna ▴ 610

3

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9

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3.3k

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metagenomics blast local

updated 4.3 years ago by onestop_data ▴ 330 • written 7.6 years ago by fhsantanna ▴ 610

3

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6

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6.4k

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alignment identity batch

updated 4.7 years ago by gadget • 0 • written 7.3 years ago by fhsantanna ▴ 610

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1

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745

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binning phylotyping metagenomics

4.8 years ago by fhsantanna ▴ 610

1

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6

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1.6k

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psiblast parallel

updated 4.8 years ago by Biostar 20 • written 4.9 years ago by fhsantanna ▴ 610

5

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8

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1.9k

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genbank proteins cds biopython

updated 5.0 years ago by Joe 21k • written 5.0 years ago by fhsantanna ▴ 610

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2

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802

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gene context neighborhood

5.1 years ago by fhsantanna ▴ 610

12

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10

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9.3k

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6 follow

spades Assembly contigs filtering

updated 5.1 years ago by bhclement • 0 • written 6.3 years ago by fhsantanna ▴ 610

13

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9

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12k

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7 follow

SPADES genome coverage

updated 19 months ago by Ram 43k • written 8.7 years ago by fhsantanna ▴ 610

9

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6

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7.6k

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rRNA genome denovo assembly

updated 5.5 years ago by jeremieaauger ▴ 20 • written 7.1 years ago by fhsantanna ▴ 610

2

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2

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1.5k

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rRNA 16S identity matrix species

updated 5.8 years ago by Carambakaracho ★ 3.2k • written 5.8 years ago by fhsantanna ▴ 610

2

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2

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3.1k

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checkm reapr draft-genome

updated 2.1 years ago by Ram 43k • written 9.3 years ago by fhsantanna ▴ 610

47

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13

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16k

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13 follow

illumina assembler assembly bacteria

updated 2.2 years ago by Ram 43k • written 9.5 years ago by fhsantanna ▴ 610

0

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1

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1.6k

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transcriptomics bacteria functional annotation

7.2 years ago by fhsantanna ▴ 610

6

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8

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2.6k

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phylogeny congruence software

updated 7.3 years ago by Joseph Hughes ★ 3.0k • written 7.3 years ago by fhsantanna ▴ 610

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5

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3.7k

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ion-proton Assembly iontorrent

updated 23 months ago by Ram 43k • written 9.2 years ago by fhsantanna ▴ 610

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2

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2.6k

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verification perfectmap reapr

updated 2.2 years ago by Ram 43k • written 9.4 years ago by fhsantanna ▴ 610

0

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2

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1.9k

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metagenome reads filtering denoise

updated 7.6 years ago by sacha ★ 2.4k • written 7.6 years ago by fhsantanna ▴ 610

2

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13

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3.1k

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door2

7.9 years ago by fhsantanna ▴ 610

3

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5

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3.2k

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ubuntu quake error_correction compile

updated 2.2 years ago by Ram 43k • written 9.4 years ago by fhsantanna ▴ 610

5

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11

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3.5k

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rnaseq mapq

8.1 years ago by fhsantanna ▴ 610

9

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2

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2.4k

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bbmap htseq

updated 8.1 years ago by GenoMax 141k • written 8.1 years ago by fhsantanna ▴ 610

3

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5

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3.2k

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biopython

updated 21 months ago by Ram 43k • written 8.3 years ago by fhsantanna ▴ 610

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3

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2.3k

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CD-HIT alignment redundancy

8.3 years ago by fhsantanna ▴ 610

2

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3

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1.6k

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genbank ftp

updated 8.9 years ago by h.mon 35k • written 8.9 years ago by fhsantanna ▴ 610

0

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1

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1.5k

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redundancy alignment phylogeny

updated 16 months ago by Ram 43k • written 8.9 years ago by fhsantanna ▴ 610

27

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50

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18k

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7 follow

fasta

updated 14 months ago by Ram 43k • written 9.0 years ago by fhsantanna ▴ 610

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3

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1.9k

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tblastx artemis act

updated 15 months ago by Ram 43k • written 9.0 years ago by fhsantanna ▴ 610

3

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4

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4.9k

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get_homologues venn-diagram ortholog

updated 22 months ago by Ram 43k • written 9.0 years ago by fhsantanna ▴ 610

8

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5

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2.2k

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interval low-coverage script

updated 24 months ago by Ram 43k • written 9.2 years ago by fhsantanna ▴ 610

1

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1

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2.1k

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error genbank submission genome

9.2 years ago by fhsantanna ▴ 610

1

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4

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2.6k

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statistics genome proteins

updated 2.1 years ago by Ram 43k • written 9.3 years ago by fhsantanna ▴ 610

14

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6

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6.5k

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assembly genome validation

updated 2.2 years ago by Ram 43k • written 9.4 years ago by fhsantanna ▴ 610

2

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1

reply

2.1k

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artifacts contigs Assembly genome spades

updated 2.2 years ago by Ram 43k • written 9.4 years ago by fhsantanna ▴ 610

3

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8

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4.3k

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read metagenomics recruitment

updated 2.3 years ago by Ram 43k • written 9.6 years ago by fhsantanna ▴ 610

0

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1

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2.0k

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promer metagenomics recruitment; artemis mummer

updated 3.1 years ago by Ram 43k • written 9.6 years ago by fhsantanna ▴ 610

1

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3

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4.2k

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installation ubuntu get_homologues

updated 3.1 years ago by Ram 43k • written 9.6 years ago by fhsantanna ▴ 610

1

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16

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5.3k

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BLAST RefSeq MEGAN5 metagenomics SEED

updated 2.4 years ago by Ram 43k • written 9.9 years ago by fhsantanna ▴ 610

2

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2

replies

3.1k

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metagenomics megan

updated 2.6 years ago by Ram 43k • written 9.9 years ago by fhsantanna ▴ 610

3

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6

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5.5k

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metagenomics megan blast

updated 2.6 years ago by Ram 43k • written 9.9 years ago by fhsantanna ▴ 610