51 minutes ago by
sarphilsar
•
0
0
votes
0
replies
11
views
0
votes
0
replies
16
views
0
votes
1
reply
23
views
0
votes
0
replies
12
views
0
votes
0
replies
17
views
updated 1 hour ago by
Ram
43k
•
written 1 hour ago by
michelafrancesconi9
▴
20
0
votes
0
replies
42
views
updated 1 hour ago by
Ram
43k
•
written 3 hours ago by
Ahiad Chen Zion
•
0
0
votes
0
replies
42
views
0
votes
0
replies
45
views
updated 3 hours ago by
Ram
43k
•
written 6 hours ago by
Alexandros
•
0
0
votes
1
reply
73
views
0
votes
0
replies
46
views
0
votes
2
replies
75
views
0
votes
0
replies
48
views
0
votes
0
replies
49
views
1
vote
2
replies
109
views
0
votes
0
replies
43
views
0
votes
0
replies
48
views
0
votes
0
replies
63
views
15 hours ago by
Jacob
•
0
0
votes
1
reply
112
views
0
votes
3
replies
198
views
3
votes
7
replies
229
views
0
votes
0
replies
69
views
1 day ago by
Lluís R.
★
1.2k
0
votes
0
replies
79
views
0
votes
4
replies
179
views
0
votes
0
replies
161
views
0
votes
3
replies
171
views
0
votes
0
replies
69
views
0
votes
2
replies
138
views
1 day ago by
Bosberg
▴
50
0
votes
0
replies
74
views
0
votes
2
replies
128
views
0
votes
0
replies
87
views
0
votes
2
replies
172
views
0
votes
0
replies
75
views
0
votes
0
replies
83
views
updated 1 day ago by
GenoMax
141k
•
written 1 day ago by
aliraza3119
•
0
0
votes
1
reply
113
views
0
votes
1
reply
186
views
updated 1 day ago by
christopher medway
▴
450
•
written 1 day ago by
Tigran
•
0
2
votes
2
replies
179
views
0
votes
9
replies
2.5k
views
6 follow
0
votes
1
reply
149
views
0
votes
0
replies
108
views
updated 1 day ago by
dariober
14k
•
written 2 days ago by
rene.j.erhardt
▴
20
1
vote
3
replies
264
views
0
votes
0
replies
127
views
0
votes
0
replies
130
views
2 days ago by
Chris
▴
260
0
votes
0
replies
538
views
0
votes
0
replies
196
views
1
vote
0
replies
152
views
0
votes
0
replies
169
views
0
votes
0
replies
164
views
0
votes
0
replies
150
views
0
votes
0
replies
159
views
Recent Votes
Recent Locations •
All
United States, just now
Greece, just now
UCLA, 1 minute ago
India, 3 minutes ago
United States, 4 minutes ago
United States, 5 minutes ago
Brazil, 8 minutes ago
Recent Awards •
All
Popular Question to
Jonathan Yoou
▴
60
Popular Question to
Chris
▴
260
Commentator to
Lluís R.
★
1.2k
Popular Question to
miles.anderson
▴
10
Popular Question to
kamhamea
•
0
Popular Question to
fanglujing
▴
60
Recent Replies
Comment: Programmatically retrieving positions of protein active site residues
by
me
▴
760
This question fits in nicely with the [SIB Swiss Institute of Bioinformatics course on Enzyme information in UniProt][1]
[1]: https://w…
Answer: Programmatically retrieving positions of protein active site residues
by
me
▴
760
This can be done via SPARQL at the UniProt.org sparql endpoint
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX fald…
Comment: KEGG Pathways
by
Sudip
•
0
No it does not. Do you know of a way that can help me achieve what I want?
Comment: Minimum RAM and Storage requirement for creating PSSM using ncbi-blast-2.2.30+-x
by
GenoMax
141k
UniRef file is 43G compressed so probably will become ~60G when uncompressed. You would likely be looking at at least that much +10-20% GB …
Comment: RNAseq one control two conditions, shared and exclusive genes
by
matteo.levorato
•
0
thank you for your comment, but yes running DESeq2 is the starting point.
dds <- DESeqDataSetFromMatrix(countData=RawCounts,
…
Comment: Need help for downloading arabdopsis thaliana reference genome fasta file and gt
by
Ram
43k
Please stop pasting a sentence in the `tags` field. That field is for subject matter keywords. I've fixed your posts this time, please be m…
Comment: from row count to tpm
by
Ram
43k
Hi https://www.biostars.org/u/119503/
Why did you delete this post?
Comment: ERROR When Using Ensembl Plants Biomart Wget API
by
GenoMax
141k
A couple of hours back using `plants.ensembl.org` was generating a 504 error but it seems to be working now.
wget -O result.txt 'http…
Comment: why renaming Idents in Seurat object doesn't work?
by
Assa Yeroslaviz
★
1.8k
Don't understand this comment. I don't have any columns with this name.
Answer: ERROR When Using Ensembl Plants Biomart Wget API
by
Ben_Ensembl
★
2.4k
Hi Dora,
For plant species such as *A. thalina*, you should use the http://plants.ensembl.org/biomart service, so the start of your wget…
Answer: Introduce SNPs on FASTA
by
christopher medway
▴
450
You could take a look at the mutfa command in [seqtk][1]
[1]: https://docs.csc.fi/apps/seqtk/#usage
Answer: Introduce SNPs on FASTA
by
Michael
54k
If you have a VCF file with all the ALT alleles that you need to insert and a reference genome in FASTA, you can use [bcftools consensus][1…
Comment: Introduce SNPs on FASTA
by
Riccardo
▴
10
Thank you very much. Is there a script or program that does it automatically?
Comment: Post-imputation plot
by
kl
▴
10
This does not warrant redoing the imputation, though? Do you have any advice of what to take care of, in this circumstance? Thanks!
Traffic: 2570 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6