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1
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2
replies
776
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Copy number variation data for population structure analysis
CNV
updated 19 months ago by ▴ 10 • written 3.6 years ago by ▴ 90
0
votes
6
replies
4.2k
views
B allele frequency (BAF)
snp
updated 3.7 years ago by ★ 3.4k • written 3.7 years ago by ▴ 90
0
votes
1
reply
4.2k
views
Comment: C: B allele frequency (BAF)
3.7 years ago by rthapa ▴ 90
0
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0
replies
4.2k
views
Comment: C: B allele frequency (BAF)
3.7 years ago by rthapa ▴ 90
0
votes
0
replies
1.4k
views
Comment: C: KaryoploteR for copy number
3.9 years ago by rthapa ▴ 90
0
votes
3
replies
1.4k
views
KaryoploteR for copy number
genome KaryoploteR
updated 3.9 years ago by 8.4k • written 3.9 years ago by ▴ 90
3
votes
1
reply
2.3k
views
quality check of vcf files
vcf SNP
updated 3.9 years ago by ▴ 240 • written 3.9 years ago by ▴ 90
0
votes
0
replies
695
views
CNVRs visualization with karyoploteR
cnv
4.0 years ago by rthapa ▴ 90
0
votes
0
replies
564
views
Phenotypic evaluation of significant SNPs from GWAS result
SNP
4.1 years ago by rthapa ▴ 90
0
votes
0
replies
820
views
GWAS of ordinal phenotypes with MCMCglmm model
SNP r
4.2 years ago by rthapa ▴ 90
0
votes
0
replies
4.2k
views
Comment: C: error reading bed files for bedtools intersect
4.3 years ago by rthapa ▴ 90
0
votes
1
reply
4.2k
views
Comment: C: error reading bed files for bedtools intersect
4.3 years ago by rthapa ▴ 90
0
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0
replies
4.2k
views
Comment: C: error reading bed files for bedtools intersect
4.3 years ago by rthapa ▴ 90
0
votes
1
reply
4.2k
views
Comment: C: error reading bed files for bedtools intersect
4.3 years ago by rthapa ▴ 90
0
votes
2
replies
4.2k
views
Comment: C: error reading bed files for bedtools intersect
4.3 years ago by rthapa ▴ 90
0
votes
0
replies
4.2k
views
Comment: C: error reading bed files for bedtools intersect
4.3 years ago by rthapa ▴ 90
0
votes
12
replies
4.2k
views
error reading bed files for bedtools intersect
bedtools intersect
updated 4.3 years ago by 161k • written 4.3 years ago by ▴ 90
0
votes
0
replies
4.2k
views
Comment: C: error reading bed files for bedtools intersect
4.3 years ago by rthapa ▴ 90
0
votes
0
replies
1.2k
views
GO term using GOAtools
GOAtools
4.4 years ago by rthapa ▴ 90
0
votes
1
reply
814
views
Comment: C: methylation coverage in the gene region
4.5 years ago by rthapa ▴ 90
0
votes
3
replies
814
views
methylation coverage in the gene region
methylation
4.5 years ago by rthapa ▴ 90
2
votes
0
replies
7.8k
views
Comment: C: Bedtools problem : It looks as though you have less than 3 columns at line: 1.
4.5 years ago by rthapa ▴ 90
0
votes
1
reply
7.8k
views
Answer: A: Bedtools problem : It looks as though you have less than 3 columns at line: 1.
4.5 years ago by rthapa ▴ 90
0
votes
0
replies
835
views
codon adaptation index (CAI) estimation
codon usage
4.5 years ago by rthapa ▴ 90
0
votes
0
replies
844
views
codon bias estimation (CAI)
protein
4.5 years ago by rthapa ▴ 90
1
vote
1
reply
1.1k
views
methylation coverage in the gene region
methylation
updated 4.5 years ago by 82k • written 4.5 years ago by ▴ 90
0
votes
1
reply
1.1k
views
Comment: C: coverage of narrow peaks on genomic region using bedtools
4.6 years ago by rthapa ▴ 90
1
vote
3
replies
1.1k
views
coverage of narrow peaks on genomic region using bedtools
ChIP-Seq
updated 4.6 years ago by ★ 3.8k • written 4.6 years ago by ▴ 90
0
votes
0
replies
5.2k
views
Comment: C: pysam alignment error
4.6 years ago by rthapa ▴ 90
0
votes
1
reply
5.2k
views
Comment: C: pysam alignment error
4.6 years ago by rthapa ▴ 90
0
votes
0
replies
5.2k
views
Comment: C: pysam alignment error
4.6 years ago by rthapa ▴ 90
0
votes
1
reply
5.2k
views
Comment: C: pysam alignment error
4.6 years ago by rthapa ▴ 90
0
votes
0
replies
5.2k
views
Comment: C: pysam alignment error
4.6 years ago by rthapa ▴ 90
0
votes
1
reply
5.2k
views
Comment: C: pysam alignment error
4.6 years ago by rthapa ▴ 90
4
votes
13
replies
5.2k
views
pysam alignment error
alignment
updated 4.6 years ago by ▴ 580 • written 4.6 years ago by ▴ 90
0
votes
1
reply
739
views
parent GO terms
genome
4.6 years ago by rthapa ▴ 90
3
votes
1
reply
837
views
Chip seq coverage
ChIP-Seq
4.6 years ago by rthapa ▴ 90
0
votes
0
replies
629
views
SNP density per genes
SNP
4.6 years ago by rthapa ▴ 90
0
votes
0
replies
4.4k
views
Comment: C: CAI in python: SeqUtils.CodonUsage vs CAI package
4.6 years ago by rthapa ▴ 90
0
votes
0
replies
746
views
Maximum intensity among overlapping peaks and peak coverage
ChIP-Seq
4.6 years ago by rthapa ▴ 90
0
votes
1
reply
1.7k
views
DESeq2 lfc shrinkage
rna-seq
updated 4.9 years ago by ▴ 470 • written 6.3 years ago by ▴ 90
0
votes
1
reply
801
views
Significance level of each variable used in the model
RNA-Seq
updated 5.1 years ago by 87k • written 5.1 years ago by ▴ 90
0
votes
0
replies
4.1k
views
Comment: C: ANOVA or Linear regression for RNAseq data analysis with 3 factors
updated 5.1 years ago by 87k • written 5.1 years ago by ▴ 90
0
votes
0
replies
3.4k
views
Comment: C: Preforming differential expression (DE) on edgeR with control and different geno
5.1 years ago by rthapa ▴ 90
0
votes
1
reply
4.1k
views
Comment: C: ANOVA or Linear regression for RNAseq data analysis with 3 factors
5.1 years ago by rthapa ▴ 90
0
votes
0
replies
3.5k
views
Comment: C: What are the requirements to use data generated in other microarray experiments
5.2 years ago by rthapa ▴ 90
0
votes
1
reply
855
views
Haplotypes analysis from SNP chip data
SNP
updated 5.2 years ago by 87k • written 5.2 years ago by ▴ 90
0
votes
0
replies
2.4k
views
Comment: C: r2 and LD value estimation between significant SNPs identified from GWAS
5.2 years ago by rthapa ▴ 90
1
vote
2
replies
2.4k
views
r2 and LD value estimation between significant SNPs identified from GWAS
SNP R
5.2 years ago by rthapa ▴ 90
0
votes
1
reply
703
views
Comparison of samples of different read lengths in differential gene expression analysis
RNA-Seq
updated 5.2 years ago by 14k • written 5.2 years ago by ▴ 90
107 results • Page 2 of 3
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