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rthapa
rthapa
Reputation:
90
Joined:
8.6 years ago
Last seen:
2.3 years ago
Location:
United States
Latest posts by user
0 votes
0 replies
688 views
Bacterial genome alignment with mauve
bacteria mauve genome
written by rthapa • rthapa
0 votes
1 reply
0 views
Comment: Comment: allele frequency from different read depths
written by rthapa • rthapa
0 votes
1 reply
0 views
Comment: Comment: allele frequency from different read depths
written by rthapa • rthapa
1 vote
5 replies
3.1K views
allele frequency from different read depths
allele depth frequency vcf read
updated by pbpanigrahi pbpanigrahi • written by rthapa • rthapa
0 votes
0 replies
0 views
Comment: Comment: subset of paired end reads from bam file or fastq file of different depth
written by rthapa • rthapa
0 votes
2 replies
1.7K views
subset of paired end reads from bam file or fastq file of different depth
depth shortread samtools read
written by rthapa • rthapa
0 votes
1 reply
0 views
Comment: Comment: Fis, Ho and He calculation from Whole Genome Seq data
written by rthapa • rthapa
0 votes
0 replies
923 views
Identification of presence of genes by aligning the illumina reads to reference genome with Geneious
geneious alignment mapping
written by rthapa • rthapa
0 votes
0 replies
683 views
finding coverage of particular gene sequence from illumina short reads
coverage illumina
written by rthapa • rthapa
0 votes
0 replies
0 views
Comment: C: Whole-genome alignment of two or more bacterial genomes - find structural varian
written by rthapa • rthapa
0 votes
1 reply
0 views
Comment: C: mummer dot plot
written by rthapa • rthapa
0 votes
1 reply
0 views
Comment: C: MUMmer plot visualization
written by rthapa • rthapa
0 votes
1 reply
0 views
Comment: C: MUMmer plot visualization
updated by GenoMax GenoMax • written by rthapa • rthapa
0 votes
1 reply
0 views
Comment: C: MUMmer plot visualization
updated by GenoMax GenoMax • written by rthapa • rthapa
0 votes
7 replies
5.7K views
MUMmer plot visualization
mummer plot
updated by Carlos • Carlos • written by rthapa • rthapa
0 votes
0 replies
1.1K views
MUMmer for structural variant call
mummer structural variants circlator
written by rthapa • rthapa
0 votes
1 reply
0 views
Comment: C: Rotate circular contigs to replication initiator protein (ex. dnaA, repA)
written by rthapa • rthapa
0 votes
1 reply
0 views
Comment: C: Rotate circular contigs to replication initiator protein (ex. dnaA, repA)
written by rthapa • rthapa
0 votes
0 replies
938 views
Assembly based structural variants detection
assembly structural variants syri mumandco
written by rthapa • rthapa
0 votes
0 replies
0 views
Comment: C: Mauve alignment vs samtools for SNP calling
written by rthapa • rthapa
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