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TCGA array expression and rnaseq expression batch correction
tcga rnaseq expression
4.6 years ago by Omics data mining ▴ 260
2
votes
2
replies
1.4k
views
Input for VariantsToBinaryPed
GATK plink
updated 4.7 years ago by 10k • written 5.9 years ago by ▴ 260
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0
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1.3k
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Multi samples (Normal and Tumor) somatic SNPs identification
GATK SNP VCF mutlisamplevcf whole-exom
4.7 years ago by Omics data mining ▴ 260
0
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1
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832
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multi sample vcf to data matrix
VCF SNP GATK
updated 4.7 years ago by 82k • written 4.7 years ago by ▴ 260
2
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2
replies
3.2k
views
TCGA survival data classification
TCGA survival
updated 4.7 years ago by 88k • written 4.7 years ago by ▴ 260
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3
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2.4k
views
ConsensusClusterPlus for small sample
ConsensusClusterPlus
updated 5.2 years ago by ▴ 400 • written 5.4 years ago by ▴ 260
0
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1
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874
views
Error of Netics : Multi omics intergration tool
Netics multi omics integration
updated 5.2 years ago by 47k • written 5.2 years ago by ▴ 260
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2
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2.5k
views
Survival analysis based on gene expression
Survival gene expression
updated 5.2 years ago by 20 • written 5.3 years ago by ▴ 260
2
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2
replies
7.3k
views
genlist for clusterprofiler
clusterprofiler R bioconductor
updated 5.6 years ago by 11k • written 6.2 years ago by ▴ 260
0
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1
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1.9k
views
cytoscape subnetwork from WGCNA based modules
cytoscape TieDie subnetwork
updated 5.7 years ago by 43k • written 5.7 years ago by ▴ 260
0
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5
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1.9k
views
TCGA SNP data
TCGA maf2vcf SNPs PAAD
updated 5.8 years ago by 88k • written 5.8 years ago by ▴ 260
4
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2
replies
3.9k
views
how to create .gzi index
rnaseq genome
updated 5.8 years ago by ▴ 450 • written 5.8 years ago by ▴ 260
2
votes
2
replies
1.3k
views
Immunogenic signature in genesset
immunogenic signatures MSigDB RNASeq
updated 5.8 years ago by 88k • written 5.8 years ago by ▴ 260
1
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7
replies
4.9k
views
upsetplot in clusterprofiler
clusterProfiler R bioconductor
updated 5.8 years ago by ★ 2.6k • written 5.8 years ago by ▴ 260
0
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3
replies
1.9k
views
TCGA SNP to plink
TCGA MAF PLINK
5.8 years ago by Omics data mining ▴ 260
2
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5
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3.5k
views
Error running the rMATS for splicings
rMATS NGS RNA-Seq
updated 5.8 years ago by 20 • written 5.9 years ago by ▴ 260
0
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0
replies
825
views
MatrixEpistasis input format
MatrixEpistasis SNP-SNP interaction
5.9 years ago by Omics data mining ▴ 260
0
votes
5
replies
1.5k
views
How to get TCGA SNP in vcf and process in PLINK
TCGA VCF PLINK
updated 5.9 years ago by ▴ 420 • written 5.9 years ago by ▴ 260
0
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0
replies
2.6k
views
differential survival genes and survexpress
survexpress rnaseq
5.9 years ago by Omics data mining ▴ 260
0
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0
replies
1.2k
views
eqtl using ggtools
GGtools
5.9 years ago by Omics data mining ▴ 260
0
votes
2
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877
views
input of gene list in karyoplotR
karyoplotR
6.0 years ago by Omics data mining ▴ 260
0
votes
6
replies
1.7k
views
Exome mean coverage for human
Exome Seq sequencing alignment
6.0 years ago by Omics data mining ▴ 260
0
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2
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1.2k
views
filters need to apply for Exome bam files after mapping
Exome alignment sequencing collectHSmetrices
6.0 years ago by Omics data mining ▴ 260
0
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5
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1.9k
views
kpPlotLinks function not working in karyoplotR
karyoploteR R SNP rna-seq
updated 11 months ago by 43k • written 6.3 years ago by ▴ 260
0
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1
reply
1.3k
views
non matched control for PDAC samples
RNA-Seq TCGA tumour pdac
updated 6.0 years ago by 88k • written 6.0 years ago by ▴ 260
2
votes
5
replies
1.2k
views
error in downloading kissplice
kissplice
updated 6.1 years ago by ▴ 90 • written 6.1 years ago by ▴ 260
6
votes
2
replies
2.2k
views
choice of human genome before RNASeq mapping
human genome ENSEMBL RNASEQ mapping
updated 6.2 years ago by ★ 2.6k • written 6.2 years ago by ▴ 260
0
votes
4
replies
3.3k
views
wgcna modules detection and MEs
wgcna
6.2 years ago by Omics data mining ▴ 260
1
vote
2
replies
1.7k
views
From gene list to disease ontology
Fundo disease gene association DOSE
6.2 years ago by Omics data mining ▴ 260
5
votes
4
replies
2.3k
views
Threshold for centrality score during prediction of Hub genes in co expression network
network analysis Hub genes in network CytoNCA
6.2 years ago by Omics data mining ▴ 260
0
votes
4
replies
2.0k
views
Ranking of genes in multiple samples
rnaseq next-gen
6.3 years ago by Omics data mining ▴ 260
0
votes
0
replies
970
views
RNASEQ SNP GATK comparision with TCGA and COSMIC DATABASE
RNA-Seq SNP
6.4 years ago by Omics data mining ▴ 260
3
votes
4
replies
1.8k
views
20 millions reads per sample for SNP
RNA-Seq SNP
updated 6.4 years ago by 14k • written 6.4 years ago by ▴ 260
2
votes
2
replies
4.4k
views
Markduplicates in RNASEQ
RNA-Seq SNP
updated 6.4 years ago by 5.2k • written 6.4 years ago by ▴ 260
0
votes
3
replies
1.6k
views
RNASEQ preprocessing and insert size
RNA-Seq
updated 6.5 years ago by 142k • written 6.5 years ago by ▴ 260
1
vote
10
replies
3.7k
views
6 follow
Uniquely mapped in Human
RNA-Seq
updated 6.6 years ago by ▴ 590 • written 6.6 years ago by ▴ 260
1
vote
1
reply
1.4k
views
command line wrapper for STAR
ALL
6.8 years ago by Omics data mining ▴ 260
3
votes
5
replies
5.2k
views
rRNA in human
RNA-Seq
updated 2.1 years ago by • 0 • written 6.8 years ago by ▴ 260
0
votes
1
reply
1.5k
views
input format file for DiscoSNP software run
SNP discoSNP
updated 21 months ago by 43k • written 8.5 years ago by ▴ 260
0
votes
0
replies
1.3k
views
tool for snp detection in allotetraploid species
SNP
updated 21 months ago by 43k • written 8.6 years ago by ▴ 260
0
votes
2
replies
1.7k
views
Error while running discoSNP
SNP
updated 23 months ago by 43k • written 8.6 years ago by ▴ 260
91 results • Page 2 of 2
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