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qstefano
qstefano
Reputation:
20
Joined:
5.9 years ago
Last seen:
2.3 years ago
Location:
Italy
Latest posts by user
0 votes
0 replies
694 views
multi-population vcf filtering for population genomics analysis
filtering wgs genomics population vcf
written by qstefano • qstefano
0 votes
1 reply
0 views
Comment: Comment: mpileup to sync file
written by qstefano • qstefano
0 votes
1 reply
0 views
Comment: Comment: Excluding SNPs from repetitive regions
written by qstefano • qstefano
0 votes
3 replies
1.4K views
Excluding SNPs from repetitive regions
population-genomics wgs variant vcf
updated by Pierre Lindenbaum Pierre Lindenbaum • written by qstefano • qstefano
0 votes
0 replies
695 views
PCA analysis of two population
wgs snps plot pca population
written by qstefano • qstefano
0 votes
1 reply
1.1K views
Relevance of alignments filtering before variant calling
filtering wgs alignment variant
updated by Pierre Lindenbaum Pierre Lindenbaum • written by qstefano • qstefano
0 votes
1 reply
0 views
Comment: Comment: double free or corruption (!prev): 0x00002aacc7b6b780 *** while running featurec
written by qstefano • qstefano
0 votes
5 replies
1.8K views
double free or corruption (!prev): 0x00002aacc7b6b780 *** while running featurecounts
counting bash hpc rna-seq r
updated by ATpoint ATpoint • written by qstefano • qstefano
0 votes
0 replies
712 views
How can i exclude genetic variability inherited from parents in offspring ?
genomics haplotypes wgs vcf population
written by qstefano • qstefano
0 votes
1 reply
781 views
Extract 'endpos' feature from bam file
alignment bam rna-seq samtools
updated by Ram Ram • written by qstefano • qstefano
0 votes
1 reply
0 views
Comment: Comment: Unusual insert size histogram with CollectInsertSizeMetrics PICARD
written by qstefano • qstefano
0 votes
1 reply
0 views
Comment: Comment: Unusual insert size histogram with CollectInsertSizeMetrics PICARD
written by qstefano • qstefano
0 votes
1 reply
0 views
Comment: Comment: Unusual insert size histogram with CollectInsertSizeMetrics PICARD
written by qstefano • qstefano
0 votes
0 replies
844 views
Variant calling for pool-seq data
pool-seq dna-seq variants variant.calling
written by qstefano • qstefano
0 votes
0 replies
0 views
Comment: Comment: [bwa_aln_core] calculate SA coordinate... script.sh: line 91: 183402 Killed
written by qstefano • qstefano
0 votes
3 replies
1.8K views
[bwa_aln_core] calculate SA coordinate... script.sh: line 91: 183402 Killed
hpc bwa alignment
updated by Ram Ram • written by qstefano • qstefano
0 votes
1 reply
1.2K views
Explanation of dimension differences between bam files (BWA aln and BWA mem)
r rna-seq bwa gene alignment
updated by Arup Ghosh Arup Ghosh • written by qstefano • qstefano
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0 replies
0 views
Comment: Comment: Installation of samtools on anaconda
written by qstefano • qstefano
0 votes
2 replies
4.6K views
Installation of samtools on anaconda
env hpc anaconda bash
updated by rpolicastro rpolicastro • written by qstefano • qstefano
0 votes
0 replies
993 views
biomartr::getGenome() issue
refseq r assembly ncbi package
written by qstefano • qstefano
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