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0
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0
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579
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Why ABSOLUTE calculate CCF=NA?
ABSOLUTE
3.0 years ago by Laven9 • 0
0
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0
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4.0k
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Comment: C: Which Driver-Gene Detecting Software Supports hg38?
3.2 years ago by Laven9 • 0
0
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0
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781
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Comment: C: error when running "SeuratToExpressionSet"
3.2 years ago by Laven9 • 0
0
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2
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781
views
error when running "SeuratToExpressionSet"
SeuratToExpressionSet Seurat
3.2 years ago by Laven9 • 0
0
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1
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4.3k
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Comment: C: Set.seed in Seurat
3.5 years ago by Laven9 • 0
0
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4
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4.3k
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Set.seed in Seurat
Seurat
updated 13 months ago by 43k • written 3.5 years ago by • 0
4
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3
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948
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Strange plots I got from R studio
R
3.5 years ago by Laven9 • 0
0
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3
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2.2k
views
ERROR running annovar with cosmic90
annovar cosmic
updated 4.5 years ago by ▴ 30 • written 4.6 years ago by • 0
0
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0
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841
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How to interpret ABSOLUTE output?
ABSOLUTE
4.6 years ago by Laven9 • 0
0
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0
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2.2k
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Comment: A: A question on GetPileupSummaries (GATK)
4.6 years ago by Laven9 • 0
0
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2
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2.2k
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A question on GetPileupSummaries (GATK)
GetPileupSummaries
4.6 years ago by Laven9 • 0
0
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0
replies
3.2k
views
Comment: A: A question on GenomicsDBImport (GATK)
updated 4.6 years ago by 142k • written 4.6 years ago by • 0
0
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4
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3.2k
views
A question on GenomicsDBImport (GATK)
GenomicsDBImport
4.6 years ago by Laven9 • 0
0
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0
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3.2k
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Comment: A: A question on GenomicsDBImport (GATK)
4.6 years ago by Laven9 • 0
2
votes
3
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1.9k
views
Can Mutect2 be used for paper?
gatk Mutect2
updated 4.8 years ago by 11k • written 4.8 years ago by • 0
0
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0
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1.9k
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Comment: C: Can Mutect2 be used for paper?
4.8 years ago by Laven9 • 0
0
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0
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761
views
Comment: C: What tools could be used for false positive filtering of somatic variants called
4.8 years ago by Laven9 • 0
0
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1
reply
761
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What tools could be used for false positive filtering of somatic variants called? And how do they work?
next-gen
updated 4.8 years ago by 16k • written 4.8 years ago by • 0
0
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0
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939
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Comment: C: A small detail when use VEP
4.8 years ago by Laven9 • 0
1
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2
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939
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A small detail when use VEP
VEP
updated 4.8 years ago by 47k • written 4.8 years ago by • 0
0
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0
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1.9k
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Comment: C: How long will bam-readcount take to run human samples?
4.8 years ago by Laven9 • 0
0
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1
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1.9k
views
Comment: C: How long will bam-readcount take to run human samples?
4.8 years ago by Laven9 • 0
0
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1
reply
1.9k
views
Comment: C: How long will bam-readcount take to run human samples?
4.8 years ago by Laven9 • 0
1
vote
13
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1.9k
views
How long will bam-readcount take to run human samples?
bam-readcounts
updated 4.8 years ago by 82k • written 4.8 years ago by • 0
0
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0
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1.9k
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Comment: C: How long will bam-readcount take to run human samples?
4.8 years ago by Laven9 • 0
0
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0
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1.9k
views
Comment: C: How long will bam-readcount take to run human samples?
4.8 years ago by Laven9 • 0
0
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1
reply
1.9k
views
Comment: C: How long will bam-readcount take to run human samples?
4.8 years ago by Laven9 • 0
0
votes
1
reply
1.5k
views
How to interpret the output of gatk?
gatk mutect2 vcf2maf
updated 4.9 years ago by ▴ 80 • written 4.9 years ago by • 0
0
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0
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717
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Comment: C: Is there any frequently-used signature database?
4.9 years ago by Laven9 • 0
0
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2
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717
views
Is there any frequently-used signature database?
signature human cancer
updated 4.9 years ago by 19k • written 4.9 years ago by • 0
0
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1
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3.1k
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Comment: C: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
5.1 years ago by Laven9 • 0
0
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10
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3.1k
views
CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_mean" with "log2"?
CNV CNVkit Seg_mean
updated 5.1 years ago by ★ 2.8k • written 5.3 years ago by • 0
0
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1
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3.1k
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Comment: C: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
5.1 years ago by Laven9 • 0
0
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0
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680
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How can I check my title of reads added by BWA mem -R?
WES BWA
5.1 years ago by Laven9 • 0
0
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2
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3.1k
views
Comment: A: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
updated 5.1 years ago by 43k • written 5.3 years ago by • 0
0
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1
reply
1.3k
views
How to skip vep-annotating step for vcf2maf
Vcf2maf
5.1 years ago by Laven9 • 0
0
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0
replies
3.2k
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Comment: C: How can I split WES FASTQ file into sub-files for each chromosome ?
5.1 years ago by Laven9 • 0
0
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0
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3.2k
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Comment: A: How can I split WES FASTQ file into sub-files for each chromosome ?
5.1 years ago by Laven9 • 0
4
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10
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3.2k
views
How can I split WES FASTQ file into sub-files for each chromosome ?
WES split fastq chromosome
5.1 years ago by Laven9 • 0
0
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0
replies
3.2k
views
Comment: C: How can I split WES FASTQ file into sub-files for each chromosome ?
5.1 years ago by Laven9 • 0
0
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1
reply
3.2k
views
Comment: C: How can I split WES FASTQ file into sub-files for each chromosome ?
5.1 years ago by Laven9 • 0
0
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0
replies
3.2k
views
Comment: C: How can I split WES FASTQ file into sub-files for each chromosome ?
5.1 years ago by Laven9 • 0
0
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1
reply
3.2k
views
Comment: C: How can I split WES FASTQ file into sub-files for each chromosome ?
5.1 years ago by Laven9 • 0
0
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0
replies
3.1k
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Comment: C: CNVkit output problem: Is "log2" the same as "Seg_mean"? OR how can I get "Seg_m
5.3 years ago by Laven9 • 0
0
votes
2
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1.7k
views
How should I input CNV files and mutation files into R to run ABSOLUTE? Respectively or integrated?
ABSOLUTE
updated 5.3 years ago by 87k • written 5.4 years ago by • 0
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