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1,000 results • Page
1 of 20
Sort: Rank
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Votes
Replies
0
votes
0
replies
53
views
Job:
Postdoctoral Position in Bioinformatics - Mainz, Germany
Biology
R-loops
Genomics
NGS
Post-doc
6 hours ago by
4r-rtg
• 0
1
vote
0
replies
203
views
Job:
CTO/founding engineer role at Voyant Bio
engineer
6 days ago by
Assaf
▴ 10
0
votes
0
replies
145
views
Job:
Ensembl Plants Senior Bioinformatician
ebi
embl
genomics
ensembl
10 days ago by
Ben_Ensembl
★ 2.4k
0
votes
0
replies
264
views
Job:
Consultant to update a Snakemake workflow with the new Kubernetes executor plugin for Snakemake 8
Kubernetes
DevOps
executor
AWS
Snakemake
updated 15 days ago by
Michael
54k • written 15 days ago by
jonrkarr
▴ 100
0
votes
0
replies
209
views
Job:
Ensembl Outreach Project Leader
ebi
embl
genomics
ensembl
10 days ago by
Ben_Ensembl
★ 2.4k
0
votes
0
replies
208
views
Job:
Bioinformatics PhD position in Aarhus, Denmark
PhD
Genomics
Cancer
updated 21 days ago by
Ram
43k • written 23 days ago by
besen
• 0
0
votes
0
replies
292
views
Job:
PhD in bioinformatics / computational biology
NGS
Omics
Evolution
Aging
24 days ago by
Arne.Sahm
• 0
0
votes
1
reply
2.4k
views
Job:
Full Stack Web Developer - Cambridge, UK
JavaScript
Python
Visualisation
written 8.4 years ago by
Richard Smith
▴ 400
2
votes
1
reply
631
views
Job:
Exciting 2024 Summer Internship Opportunity in Translational Genetics Arrowhead Pharmaceuticals!
intern
26 days ago by
Shicheng Guo
★ 9.4k
1
vote
0
replies
178
views
Job:
Job Opening - Fred Hutch - Director of Training & Community
fred-hutchinson
updated 5 weeks ago by
Ram
43k • written 5 weeks ago by
Fred Hutch (Recruiting)
▴ 20
0
votes
0
replies
234
views
Job:
Post-doctoral positions in computational biomedicine
data-science
biomedicine
machine-learning
updated 5 weeks ago by
Ram
43k • written 5 weeks ago by
pandey.gaurav
▴ 200
0
votes
0
replies
262
views
Job:
Project Scientist in Neurobiology at UC San Diego
UCSD
Biology
LifeScience
HigherEducation
7 weeks ago by
lta
▴ 10
0
votes
0
replies
258
views
Job:
Bioinformatics/Data Science postdoc position in Aarhus, Denmark
data-science
genomics
postdoc
updated 26 days ago by
Ram
43k • written 7 weeks ago by
besen
• 0
0
votes
0
replies
285
views
Job:
Bioinformatics Assistant Researcher - Metabarcoding - Honolulu, Hawaii
DNA
postdoc
eDNA
environmental
metabarcoding
7 weeks ago by
Jonathan
• 0
0
votes
0
replies
175
views
Job:
Bioanalysis Neuroimaging position
python
machine-learning
Neuroscience
updated 7 weeks ago by
Ram
43k • written 7 weeks ago by
sivan.kinreich
• 0
0
votes
0
replies
386
views
Job:
Data scientist/Bioinformatician University of Wisconsin Biotechnology Center Bioinformatics Resource Center
data-scientist
updated 7 weeks ago by
Ram
43k • written 8 weeks ago by
jv
★ 1.8k
0
votes
0
replies
192
views
Job:
Postdoctoral research position at the Barts Cancer Institute - Queen Mary University London
cancer
epigenomics
transposable-elements
updated 8 weeks ago by
Ram
43k • written 8 weeks ago by
Sergio Martínez Cuesta
▴ 230
0
votes
0
replies
435
views
Job:
Assistant professor in Computational biology with a focus on machine learning for multimodal molecular biology data
Multiomics
Machine-Learning
8 weeks ago by
lukas.kall
▴ 40
1
vote
2
replies
566
views
Job:
Junior Research Software Engineer/ Research Software Engineer - web resources for virology
software
developer
web
virology
6 weeks ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
285
views
Job:
PhD offer metabarcoding plant insect interaction in agricultural fields in Germany
Metabarcoding
enthomology
botany
8 weeks ago by
b.gemeinholzer
• 0
0
votes
0
replies
350
views
Job:
Postdoctoral Fellow / Staff Scientist - Genomic Data Modeling Lab
genomics
machine-learning
Seattle
updated 9 weeks ago by
Ram
43k • written 9 weeks ago by
pejman.m
• 0
3
votes
1
reply
444
views
Job:
AN INTEGRATED IN SILICO AND IN VITRO STUDY ON THE DEVELOPMENT OF A COMPUTATIONAL METHOD FOR THE PREDICTION OF O-GLCNAC MODIFIED PROTEINS
proteomics
updated 9 weeks ago by
Ram
43k • written 9 weeks ago by
Anooshian
• 0
1
vote
3
replies
595
views
Job:
1 Bioinformatician position in San Sebastian (Spain)
postdoc
phd
proteomics
scRNAseq
transcriptomics
10 weeks ago by
ev97
▴ 20
0
votes
1
reply
330
views
Job:
FT Tenured Faculty Position at Washington University School of Medicine in St. Louis
Neurogenomics
Fulltime
Missouri
Tenured
Faculty
updated 10 weeks ago by
Ram
43k • written 10 weeks ago by
Christi
• 0
0
votes
0
replies
493
views
Job:
PhD fellowship in bioinformatic analysis of host - pathogen interactions in the context of anti-microbial resistance in pigs
non-coding-RNA
updated 11 weeks ago by
Ram
43k • written 11 weeks ago by
info
▴ 80
0
votes
0
replies
291
views
Job:
Project Scientist in Molecular Biology at UC San Diego
UCSD
Biology
LifeScience
HigherEducation
11 weeks ago by
lta
▴ 10
1
vote
3
replies
639
views
Job:
Looking for bioinformatics help
genomics
updated 11 weeks ago by
Ram
43k • written 11 weeks ago by
aj123
▴ 120
1
vote
0
replies
279
views
Job:
Postdoctoral researcher in computational (epi)genomics (Maastricht, The Netherlands)
Long-read-Sequencing
Postdoc
Homo-Sapiens
Repetitive-Elements
Epigenetics
updated 11 weeks ago by
Ram
43k • written 11 weeks ago by
Athina Vidaki
▴ 10
0
votes
0
replies
1.1k
views
Job:
Job Vacancy Announcement - Health Scientist Administrator (Program Officer) - Genomics Research Branch (GRB)(Branch Chief: Jonathan Pevsner)
Genetics
Program-Officer
Genomics
updated 11 weeks ago by
Ram
43k • written 11 weeks ago by
NIMH Search
• 0
0
votes
1
reply
337
views
Job:
How to calculate hub genes in Cytoscape from a WGCNA output?
Cytoscape
WGCNA
network-analysis
updated 11 weeks ago by
Ram
43k • written 11 weeks ago by
pavelasquezv
▴ 50
2
votes
1
reply
5.3k
views
Job:
Staff Scientists Positions: System Architect And Bioinformatics Engineer, Massachusetts General Hospital, Boston,
sysadmin
computational-biologist
written 11.0 years ago by
U
▴ 70
0
votes
0
replies
457
views
Job:
Computational biologist / Bioinformatician (m/f/d) / (PhD), University of Oldenburg, Germany
Medical-Genetics
Research-Position
PhD
updated 12 weeks ago by
Ram
43k • written 12 weeks ago by
AHP
• 0
0
votes
0
replies
288
views
Job:
Job Vacancy Announcement - Health Scientist Administrator (Program Officer) - Translational Genomics for Mental Health (TGMH)
Program-Officer
Translational-Genomics
updated 3 months ago by
Ram
43k • written 3 months ago by
NIMH Search
• 0
1
vote
0
replies
356
views
Job:
Researcher/Postdoc to enhance computational resources for regulatory genomics with deep learning
deep-learning
updated 3 months ago by
Ram
43k • written 3 months ago by
Anthony Mathelier
▴ 910
2
votes
3
replies
708
views
Job:
Bio-informatics Scientist at BASF | Nunhems (Near Eindhoven, The Netherlands)
BASF
3 months ago by
WS_jobs
• 0
0
votes
1
reply
403
views
Job:
Senior Bioinformatician position open at the University of Alabama at Birmingham
hiring
singlecell
spatial
transcriptomics
updated 3 months ago by
Ram
43k • written 3 months ago by
lianov
▴ 20
0
votes
0
replies
360
views
Job:
Postdoc for computational biology on cancer omics data analysis at Liang lab of Wistar Institute, Philadelphia, US
Omics
Postdoc
computational
4 months ago by
omicsresearch
• 0
0
votes
1
reply
482
views
Job:
PhD fellowship in bioinformatic analysis of host - pathogen interactions in the context of anti-microbial resistance in pigs
PhD
fellowship
anti-microbial-resistance
updated 4 months ago by
Ram
43k • written 4 months ago by
info
▴ 80
0
votes
0
replies
460
views
Job:
PhD position at CiMUS (Santiago de Compostela, Spain)
transcriptomics
PhD
RNA-seq
Single-Cell
updated 4 months ago by
Ram
43k • written 4 months ago by
ev97
▴ 20
0
votes
0
replies
328
views
Job:
Postdocs in Anaerobic Microbial Consortia – DTU Chemical Engineering
Microbiology
microbiology
Biochemistry
Anaerobic
4 months ago by
info
▴ 80
0
votes
0
replies
615
views
Job:
Postdoc in comparative genomics of plant-associated bacteria (Polytechnic University of Madrid, SPAIN)
evolution
genomics
mutation
bacteria
genomes
5 months ago by
Alejandro
• 0
0
votes
0
replies
396
views
Job:
Assistant Professor: Molecular Biology
Biology
Molecular
UCSD
5 months ago by
lta
▴ 10
0
votes
0
replies
545
views
Job:
Bioinformatican/Data Scientist, Transplant Immunology/Genetics, Medical University of Vienna, Austria
RiskPrediction
NGS
SNP
ExomeSequencing
GeneticRiskScore
5 months ago by
aheinzel
▴ 130
0
votes
0
replies
602
views
Job:
Postdoctoral Researcher in Alzheimer's disease Genetics, Multi-Omics, and Imaging Biomarkers, St Louis, MO, USA
Multi-Omics
Imaging
Alzheimer
Genetics
5 months ago by
belloy
• 0
1
vote
0
replies
512
views
Job:
Fully funded PhD positions, Vienna, Austria
fully-funded
phd
updated 5 months ago by
colindaven
6.4k • written 5 months ago by
facultyrecruiting.ista
▴ 10
0
votes
0
replies
354
views
Job:
PhD researcher in Systems Toxicology: connecting co-expression networks to injury and pathology. Leiden NL
WGCNA
toxicology
systems-biology
gene-network
updated 5 months ago by
colindaven
6.4k • written 5 months ago by
Giulia
• 0
0
votes
0
replies
485
views
Job:
PostDoc or PhD researcher: Bioinformatician in Systems Toxicology for Chemical Safety Assessment. Leiden, the Netherlands.
WGCNA
toxicology
systems-biology
gene-network
updated 5 months ago by
colindaven
6.4k • written 5 months ago by
Giulia
• 0
0
votes
0
replies
422
views
Job:
Assistant Teaching Professor in Biological Sciences, Univ of California San Diego, La Jolla, CA
LifeScience
HigherEducation
Biology
UCSD
updated 5 months ago by
GenoMax
142k • written 5 months ago by
lta
▴ 10
1
vote
0
replies
429
views
Job:
PhD position at K.G. Jebsen Center for Parkinson’s disease. Bergen, Norway.
omics
phd
updated 5 months ago by
Ram
43k • written 5 months ago by
Gon
▴ 540
1
vote
0
replies
459
views
Job:
Postdoctoral Fellow/Researcher in Computational Biology & Gene Regulation, Norway
deep-learning
updated 5 months ago by
Ram
43k • written 5 months ago by
Anthony Mathelier
▴ 910
1,000 results • Page
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Recent Votes
Comment: Bacterial plasmid analysis
Answer: Why employ normalization methods, and how can they be utilized in DEG analysis?
Answer: Why employ normalization methods, and how can they be utilized in DEG analysis?
Answer: What analysis suitable to identify similarly expressed genes between two samples
Comment: Bacterial plasmid analysis
Comment: Problem with data downloaded from Short Reads Archive (SRA)
Comment: Problem with data downloaded from Short Reads Archive (SRA)
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Recent Replies
Comment: RNAseq one control two conditions, shared and exclusive genes
by
matteo.levorato
• 0
but why not a single matrix with the 3 different condition and then by lfcShrink function get the DEGs of each condition?
Answer: Super ehancers
by
jared.andrews07
★ 16k
Sure, you can run it on them. Stitching tends to happen less frequently since the ATAC peaks are generally less wide than H3K27ac, but it'l…
Answer: What purposes can TPM values be used for?
by
jared.andrews07
★ 16k
TPMs cannot be used for intersample comparisons, but they can be used for intrasample comparisons (e.g. comparing relative expression level…
Comment: Bacterial plasmid analysis
by
nicole.kavanagh
• 0
Thank you so much for the recommendation and the very clear explanation , it's much appreciated. I have already made core-gene phylogenies/…
Comment: What purposes can TPM values be used for?
by
Adam
▴ 30
Have you run FASTQC and checked the mapping efficiency of WT3? > would running DESeq using TPM values help solve my problem? No, DESeq sh…
Answer: How goes gene length effect the number of reads mapped
by
i.sudbery
19k
See my answer about the what hows and whens of RNA-seq normalisation here: https://www.biostars.org/p/9586553/#9586566
Comment: What purposes can TPM values be used for?
by
dsull
★ 5.9k
Since you have mutant vs wild-type, using DESeq2 is the right thing to do. Rather than showing a small table of numbers, you should make a …
Answer: What purposes can TPM values be used for?
by
i.sudbery
19k
See my post here for more details on RNA-seq normalisation: https://www.biostars.org/p/9586553/#9586566 In short, TPM normalises for ge…
Comment: Bacterial plasmid analysis
by
Zamin Iqbal
▴ 10
I vote for this, it's the best! (but also, I am Daria's PhD supervisor so I am biased). Preprint out soon(ish) [no pressure Daria!]
Comment: Downsampling long-read BAM files
by
GenoMax
142k
Is this what you used ultimately? Did this tool satisfy the "specific average depth" requirement? You could accept (green check mark) this…
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
by
Estevão
• 0
Thank you. My budget is around 20 thousand dollars.
Answer: Problem with data downloaded from Short Reads Archive (SRA)
by
atharvakarkare14
▴ 20
Prefetch files using sratoolkit **prefetch** command and then use **fasterq-dump**. There you can see the number of reads. For validation, …
Answer: Downsampling long-read BAM files
by
eesiribloom
▴ 80
random downsampling of bam files is now possible using [rasusa][1] [v1.0.0][2] with the `aln` subcommand [1]: https://github.com/mbh…
Comment: Problem with data downloaded from Short Reads Archive (SRA)
by
GenoMax
142k
Use `vdb-validate` included in `sratoolkit` to check your `*.sra` files for integrity.
Comment: Problem with data downloaded from Short Reads Archive (SRA)
by
ATpoint
82k
This `fastq-dump --split-files *.sra` gives you fastq files. I am not sure how, with the given information, one might debug your problem. A…
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