Need immediate help with Docking

Hey there , I have a project submission and I'm getting confused regarding Docking part. If someone is well equipped and known to the idea and can help it work out please connect asap. Ps: you will surely be added to my Acknowledgement!

autodock bioinformatics project docking

• 132 views • link

updated 2 months ago by chirag •

• written 2 months ago by Shreyashi •

You can react or comment on this post and we can eventually connect.

• 0 views • link

written 2 months ago by Shreyashi •

Can you add more context to the query. Bioinformatics agents like Pipette.bio can perform docking using standard tools.

• 0 views • link

written 2 months ago by chirag •

0 answers

No answers yet.

More posts like this

mg rast
written 4.4 years ago by AUROSHIS •

I am using the mg-rast software for the metagenomic analysis. I am providing the metadata and fastq.gz files as described in the mg-rast manual. But …
How to interpret ScanPy scatter plots for QC filtering?
written 5.2 years ago by Pratik

Hey ya'll, I'm working on a scRNA-seq project using publicly available data in ScanPy. I am stuck on, I guess, a QC step of filtering …
MG-RAST data submission problem
written 5.9 years ago by Rubemsilva32 •

I'm trying to send my sample of metagenome in MG-RAST, I can upload the file, but when selecting it in the submission part the sample …
How to calculate PhyloP score for only primates and rodents?
written 6.1 years ago by xinrantian •

Hey all, I'm trying to get phyloP values for several sequences but couldn't figure out how to only include primates and rodents genome. Could someone …
Hmmer for protein prediction
written 6.5 years ago by vishalchanda364 •

Hello, Regarding using the Hmmer (3.1b1) my requirement is to search amino acid sequences of predicted protein products against an HMM database prokaryotic viral orthologous …
How can I parse GFF3 using BCBio?
written 6.5 years ago by radha.jg •

I have the following code: import sys from BCBio import GFF file = sys.argv[1] for record in GFF.parse(file): print([record.seqid,record.source, record.start, record.end, record.strand]) My question is …
how can I search for Attachment sites in my bacterial genome
written 9.0 years ago by Optimist

Hello all, I'm trying to explore the genomic wide composition of a multidrug resistant bacteria. As part of this project I'm trying to detect the …
Using COG database
written 10.2 years ago by glady

Hello everyone, I want to assign COG categories to protein of my bacterial genomes. I have already done completed annotation part of the genome. But …
Docking Problem
written 14.4 years ago by Spandankeshav

<p>Hello there,</p> <p>I am trying to do dock by the use of GOLD through Discovery Studio. I successfully run the GOLD operation but unfortunately I …
Converting Entrez Ids To Genomic Intervals In Galaxy
written 14.4 years ago by Ctanes •

<p>As part of a project, I need to use cistrome Galaxy to convert Entrez IDs to genomic intervals. I uploaded the EntrezID list in tabular …