Hello everyone, I work on ontology building and I am looking for a reference database providing IRI (internationalised resource identifier) for each Ensembl gene IDs. …

Hi All, Is there any assay or technique could be applied to generate proteome-wide protein-protein interaction (PPI) for specific cell-type or tissue-type? Thanks.

Hello all, I am trying to generate consensus RNA structures from a fasta output. I was going to use RNAforester to do it on the …

I want to know the tool that has the most support and is widely used. Are there any sequence alignment tool that works with Hadoop/HDFS …

Is there a site/ resource that highlights which are the commonly used type of visualizations in bioinformatics? For e.g. we use heatmap, concept plot and …

Hi, I want to access the Gene Expression Atlas via API or parsing the web. The previous API is not longer available (http://www.ebi.ac.uk/gxa/help/AtlasApis), I couldn't …

Hi folks: From what I have learned from biologists, COG use to be (or even is) widely used for measuring "stress response" genes expression in …

Dear all, I am interested in a protein of a non-model organism whose 3-D crystal structure has not been reported. However, the protein's 3-D structure …

<p>Hi everyone, I am interested in knowing if there is any known commandline tools for 3-D structure prediction along with considering biochemical properties of amino …

<p>Is there any tool that can be used to remove redundant amino acid sequences from Fasta? I know fastx_collapser from <a href='http://hannonlab.cshl.edu/fastx_toolkit/commandline.html#fastx_collapser_usage'>fastx-toolkit</a> (<a href='http://biostar.stackexchange.com/questions/3010/how-to-remove-the-same-sequences-in-the-fasta-files'>How to …