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Analysis Of Mapreads Of Nucleopolyhedrovirus

Hi,

I have got a fasta file containing short reads of a certain Nucleopolyhedrovirus obtained from NGS platform.These short reads vary from 60 - 200 nucleotides in length. I wanted to know what all computational analysis I can do with these short reads without the help of any wet lab work.

next-gen sequencing

1 answer

You are posing the question the wrong way, hence your conundrum.

You first need to come up with a hypothesis that you would like to investigate, then you come up with the analysis that helps testing the hypothesis.

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