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Ashi
Ashi
Reputation:
20
Joined:
6.1 years ago
Last seen:
4.8 years ago
Location:
United States
Latest posts by user
0 votes
0 replies
883 views
How to plot the gap distribution of contigs wrt to reference genome
minia distribution minimap2 fasta plot
written by Ashi • Ashi
0 votes
1 reply
1.1K views
How to create a new file containing contigs of a certain length from another contigs file
fasta minia
updated by Ram Ram • written by Ashi • Ashi
0 votes
1 reply
1.2K views
How to find the co ordinates of long reads (simulated by Badreads) with respect to the reference genome
long-reads reference-genome assembly
updated by Ram Ram • written by Ashi • Ashi
0 votes
0 replies
0 views
Comment: Comment: Error while installing Minia on Linux
written by Ashi • Ashi
0 votes
3 replies
1.7K views
Error while installing Minia on Linux
minia install error linux
written by Ashi • Ashi
1 vote
2 replies
1.5K views
How to know the positions of contigs in a reference genome
mapping positions alignment reference genome contigs
updated by GenoMax GenoMax • written by Ashi • Ashi
0 votes
0 replies
0 views
Comment: C: Tool for calculating sequence statistic values (e.g. N50) for multiple bins
written by Ashi • Ashi
0 votes
1 reply
0 views
Comment: C: How to count frequency of kmers for different values of k from fasta file
written by Ashi • Ashi
0 votes
1 reply
0 views
Comment: C: How to count frequency of kmers for different values of k from fasta file
written by Ashi • Ashi
0 votes
1 reply
0 views
Comment: C: How to count frequency of kmers for different values of k from fasta file
updated by GenoMax GenoMax • written by Ashi • Ashi
0 votes
0 replies
0 views
Comment: C: How to count frequency of kmers for different values of k from fasta file
written by Ashi • Ashi
0 votes
1 reply
0 views
Comment: C: How to count frequency of kmers for different values of k from fasta file
written by Ashi • Ashi
0 votes
12 replies
4.8K views
How to count frequency of kmers for different values of k from fasta file
fasta kmers count frequency genome
updated by GenoMax GenoMax • written by Ashi • Ashi
0 votes
0 replies
0 views
Comment: C: How does long reads help in the repeated regions of the genome
written by Ashi • Ashi
0 votes
0 replies
0 views
Comment: C: How does long reads help in the repeated regions of the genome
written by Ashi • Ashi
0 votes
4 replies
3.4K views
How does long reads help in the repeated regions of the genome
illumina short-reads long-reads ont
updated by Ram Ram • written by Ashi • Ashi
0 votes
0 replies
1.0K views
How to find all positions of one particular contig to which the short reads have been mapped?
bwa sam mapping longreads shortreads
written by Ashi • Ashi
0 votes
0 replies
1.0K views
How to check contiguity of reads mapped in BWA
long-reads contiguity mapping bwa
updated by Ram Ram • written by Ashi • Ashi
1 vote
1 reply
2.3K views
What are best Long read simulator generating Oxford Nanopore Reads
long-reads simulator ont
updated by Ram Ram • written by Ashi • Ashi
0 votes
1 reply
0 views
Comment: C: How to see set of short reads mapped to a particular long read
written by Ashi • Ashi
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