How to combining VEP and VCF in one file
I was provided a VCF file and a snp-annotated VEP output file separately. I know VEP tool can annotate VCF by adding consequence field of VEP to INFO field of VCF as discussed here. But is there a way to use VEP output tsv file to annotate VCF INFO column?
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Pierre Lindenbaum
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MAPK
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MAPK
1 answer
try bcftools annotate.
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Pierre Lindenbaum
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