.hic to .cool · Biostar

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.hic to .cool

Hi everyone,

Are there tools to convert format to transform .hic files to .cool or .h5 files in R?

Thanks in advance, Chai

hic r

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updated 6.9 years ago by zx8754

• written 6.9 years ago by c.chakraborty

Did you try to search? Maybe this? https://github.com/deeptools/HiCExplorer

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written 6.9 years ago by zx8754

Yeah I did, I got a link to HiCompare and from that to HiC-pro, straw tool and also the HiC explorer. I am interested in running the data visualization tools from HiC explorer, so I am installing the requirements tools, but I was wondering if there was already a vignette in Bioconductor for data transformation.

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written 6.9 years ago by c.chakraborty

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