This is exactly what I was looking for. Thanks!
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ThePresident
Draw circular genome with selected features
Hi guys,
What's the easiest to draw a circular map of a bacterial genome and highlight some specific genes or regions and put some coordinates/scale around?
Ex. Genome lenght is 2,500,000 bp and I want to draw it as a circle and highlight regions 1000-1500, XXX-YYY and so on.
Circos is too sophisticated for what I want to do and I have hard time understanding how I would do it with GRanges (still open to that idea if someone can point me the way).
Thanks,
TP
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EagleEye
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ThePresident
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ThePresident
2 answers
You can give a try to CiVi: User-friendly Circular Visualization for microbial genomes
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lakhujanivijay
you should accept an answer if that really helped
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lakhujanivijay
Homer simplified circos for us,
Nice resource, will give it a try also :)
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ThePresident
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