I am wondering if someone know how to convert a microarray file correctly to a VCF file. There is 23me.com microarray data convertor found here but I was wondering if there is a way to convert a microarray file to VCF?
<p>Hi there,</p> <p>I am trying to work with mrCaNaVar (http://mrcanavar.sourceforge.net/) and it requires gapped files for the genome. I was wondering is someone knows where …
<p>Hi all, I was wondering if someone could help. </p> <p>I am generating a vcf file based on the following command chain.</p> <p>samtools sort eg2.bam …
What microarray file format?
It's a text file, tab delimited.
So, you'll probably need to write a little script to do the work, then.
Did you find a way to do it? I'm also having the same problem.