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Human genome gap file

Hi there,

I am trying to work with mrCaNaVar (http://mrcanavar.sourceforge.net/) and it requires gapped files for the genome. I was wondering is someone knows where to generate a gapped file for genomes.

Thanks in advance.

gap
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updated by Chris Miller Chris Miller • written by win win

1 answer

I assume you're talking about gaps in the reference genome. One such track is available via the UCSC table browser (https://genome.ucsc.edu/cgi-bin/hgTables?command=start) under "Mapping and Sequencing", track: Gap

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written by Chris Miller Chris Miller

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