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Susmita Mandal
Susmita Mandal
Reputation:
110 (Trusted)
Joined:
8.1 years ago
Last seen:
2.5 years ago
Location:
Bangalore
Latest posts by user
0 votes
1 reply
1.6K views
Subset Seurat object from Xenium spatial data
seurat xenium spatial
updated by bk11 312 • | written by Susmita Mandal 11
0 votes
1 reply
1.7K views
Does Nextera Transposase adapter sequence affects GATK HaplotypeCaller pipeline?
snp gatk illumina rna-seq ngs
written by Susmita Mandal 11
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Comment: C: Split BAM file from paired end read into forward and reverse strand w.r.t refere
written by Susmita Mandal 11
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1 reply
0 views
Comment: C: Split BAM file from paired end read into forward and reverse strand w.r.t refere
written by Susmita Mandal 11
0 votes
1 reply
0 views
Comment: C: Split BAM file from paired end read into forward and reverse strand w.r.t refere
written by Susmita Mandal 11
0 votes
1 reply
0 views
Comment: C: Split BAM file from paired end read into forward and reverse strand w.r.t refere
written by Susmita Mandal 11
0 votes
1 reply
0 views
Comment: C: Split BAM file from paired end read into forward and reverse strand w.r.t refere
written by Susmita Mandal 11
0 votes
10 replies
6.0K views
Split BAM file from paired end read into forward and reverse strand w.r.t reference genome
rna-seq ngs snp variant calling samtools
updated by ATpoint 9.1K • | written by Susmita Mandal 11
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Comment: C: SAM flags meaning
written by Susmita Mandal 11
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0 replies
812 views
Tools and/or methods to detect allelic mapping bias.
rna-seq snp variant calling ngs alelle specific
written by Susmita Mandal 11
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1 reply
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Comment: C: Making pattern of GT:AD:DP:PL column values to be replaced by o and 1.
written by Susmita Mandal 11
1 vote
1 reply
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Comment: C: ChIP-Seq Analysis allele specific way?
written by Susmita Mandal 11
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0 replies
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Comment: C: Splitting BAM file from paired end into forward and reverse strands?
written by Susmita Mandal 11
0 votes
2 replies
2.6K views
Splitting BAM file from paired end into forward and reverse strands?
rna-seq samtools ngs rna-seq vcf
written by Susmita Mandal 11
0 votes
1 reply
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Comment: C: Tools For Analysis Allele Specific Expression In Rna-Seq Data?
written by Susmita Mandal 11
1 vote
1 reply
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Comment: C: Allele Specific Expression Analysis
written by Susmita Mandal 11
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1 reply
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Comment: C: scRNA-seq gene expression gradient onto tSNE plot
written by Susmita Mandal 11
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1 reply
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Comment: C: STAR genome genrate taking long time and less thread.
written by Susmita Mandal 11
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0 replies
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Comment: C: Allele Specific Expression Analysis
written by Susmita Mandal 11
0 votes
2 replies
1.9K views
Outliers in a boxplot: Necessary or not?
rna-seq statistics r
written by Susmita Mandal 11
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