This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Susmita Mandal
Susmita Mandal
Reputation:
110
Joined:
7.9 years ago
Last seen:
2.2 years ago
Location:
Bangalore
Latest posts by user
0 votes
1 reply
1.6K views
Subset Seurat object from Xenium spatial data
seurat xenium spatial
updated by bk11 • bk11 • written by Susmita Mandal Susmita Mandal
0 votes
1 reply
1.7K views
Does Nextera Transposase adapter sequence affects GATK HaplotypeCaller pipeline?
snp gatk illumina rna-seq ngs
written by Susmita Mandal Susmita Mandal
0 votes
0 replies
0 views
Comment: C: Split BAM file from paired end read into forward and reverse strand w.r.t refere
written by Susmita Mandal Susmita Mandal
0 votes
1 reply
0 views
Comment: C: Split BAM file from paired end read into forward and reverse strand w.r.t refere
written by Susmita Mandal Susmita Mandal
0 votes
1 reply
0 views
Comment: C: Split BAM file from paired end read into forward and reverse strand w.r.t refere
written by Susmita Mandal Susmita Mandal
0 votes
1 reply
0 views
Comment: C: Split BAM file from paired end read into forward and reverse strand w.r.t refere
written by Susmita Mandal Susmita Mandal
0 votes
1 reply
0 views
Comment: C: Split BAM file from paired end read into forward and reverse strand w.r.t refere
written by Susmita Mandal Susmita Mandal
0 votes
10 replies
5.9K views
Split BAM file from paired end read into forward and reverse strand w.r.t reference genome
rna-seq ngs snp variant calling samtools
updated by ATpoint ATpoint • written by Susmita Mandal Susmita Mandal
0 votes
0 replies
0 views
Comment: C: SAM flags meaning
written by Susmita Mandal Susmita Mandal
0 votes
0 replies
786 views
Tools and/or methods to detect allelic mapping bias.
rna-seq snp variant calling ngs alelle specific
written by Susmita Mandal Susmita Mandal
0 votes
1 reply
0 views
Comment: C: Making pattern of GT:AD:DP:PL column values to be replaced by o and 1.
written by Susmita Mandal Susmita Mandal
1 vote
1 reply
0 views
Comment: C: ChIP-Seq Analysis allele specific way?
written by Susmita Mandal Susmita Mandal
0 votes
0 replies
0 views
Comment: C: Splitting BAM file from paired end into forward and reverse strands?
written by Susmita Mandal Susmita Mandal
0 votes
2 replies
2.6K views
Splitting BAM file from paired end into forward and reverse strands?
rna-seq samtools ngs rna-seq vcf
written by Susmita Mandal Susmita Mandal
0 votes
1 reply
0 views
Comment: C: Tools For Analysis Allele Specific Expression In Rna-Seq Data?
written by Susmita Mandal Susmita Mandal
1 vote
1 reply
0 views
Comment: C: Allele Specific Expression Analysis
written by Susmita Mandal Susmita Mandal
0 votes
1 reply
0 views
Comment: C: scRNA-seq gene expression gradient onto tSNE plot
written by Susmita Mandal Susmita Mandal
0 votes
1 reply
0 views
Comment: C: STAR genome genrate taking long time and less thread.
written by Susmita Mandal Susmita Mandal
0 votes
0 replies
0 views
Comment: C: Allele Specific Expression Analysis
written by Susmita Mandal Susmita Mandal
0 votes
2 replies
1.8K views
Outliers in a boxplot: Necessary or not?
rna-seq statistics r
written by Susmita Mandal Susmita Mandal
Latest awards to user
TODO: Awards