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questions
5
votes
4
replies
2.5k
views
Efficient Programme To Construct Trees With A Given Fixed Topology
tree
phylogenetics
software
updated 4.4 years ago by
Biostar
20 • written 11.5 years ago by
Biojl
★ 1.7k
4
votes
3
replies
1.9k
views
Pipeline for detecting (TF) Chip-seq peaks in transposable elements?
ChIP-Seq
repetitive regions
transposable elements
updated 4.7 years ago by
miller.uthscsa
▴ 20 • written 7.1 years ago by
Biojl
★ 1.7k
2
votes
5
replies
1.5k
views
Error in some hog codes using pyham
oma
updated 4.9 years ago by
clement.train
▴ 60 • written 4.9 years ago by
Biojl
★ 1.7k
3
votes
9
replies
10k
views
Calculate Pairwise Wilcox.Test For Several Categories And Plot Significance Into A Boxplot With Ggplot2
r
statistics
plot
updated 5.2 years ago by
Biostar
20 • written 10.8 years ago by
Biojl
★ 1.7k
3
votes
7
replies
1.5k
views
Download cdna sequences from OMA
oma
orthologs
updated 5.5 years ago by
Adrian Altenhoff
★ 1.1k • written 5.5 years ago by
Biojl
★ 1.7k
2
votes
9
replies
1.6k
views
parse xml proteinpredict files
proteinpredict
parse
xml
biopython
updated 6.3 years ago by
Pierre Lindenbaum
161k • written 6.3 years ago by
Biojl
★ 1.7k
0
votes
1
reply
1.8k
views
bulk download in ENCODE
ChIP-Seq
encode
updated 13 months ago by
Ram
43k • written 6.8 years ago by
Biojl
★ 1.7k
0
votes
0
replies
1.4k
views
Mobile elements studied in the 1000 genomes
1000 genomes
transposable elements
data
7.0 years ago by
Biojl
★ 1.7k
17
votes
12
replies
4.0k
views
Automatic Data Extraction From Timetree
evolution
tree
updated 7.6 years ago by
Biostar
20 • written 11.0 years ago by
Biojl
★ 1.7k
4
votes
5
replies
3.3k
views
convert GFF3 files from one genome version to another (Drosophila)
ChIP-Seq
genome
sequence
7.7 years ago by
Biojl
★ 1.7k
3
votes
3
replies
1.9k
views
Editing Contigs Browser
contigs
updated 8.6 years ago by
Biostar
20 • written 10.5 years ago by
Biojl
★ 1.7k
2
votes
1
reply
2.4k
views
Where to obtain a gene rpkm matrix for mouse (from mouse encode)
encode
RNA-Seq
mouse
updated 23 months ago by
Ram
43k • written 9.1 years ago by
Biojl
★ 1.7k
2
votes
6
replies
5.5k
views
Obtain conservation (or % ident) in a multiple sequence alignment
alignment
Python
updated 23 months ago by
Ram
43k • written 9.2 years ago by
Biojl
★ 1.7k
0
votes
2
replies
2.2k
views
Number of genes expressed in a tissue (in humans)
RNA-Seq
ensembl
database
tissue
updated 2.3 years ago by
Ram
43k • written 9.7 years ago by
Biojl
★ 1.7k
10
votes
2
replies
7.8k
views
Download data from OMIM
OMIM
updated 9.7 years ago by
Biostar
20 • written 10.0 years ago by
Biojl
★ 1.7k
4
votes
4
replies
4.5k
views
How To Calculate Number Of Gap Windows And Their Length In A Multiple Alignment
python
alignment
biopython
updated 9.8 years ago by
Biostar
20 • written 11.7 years ago by
Biojl
★ 1.7k
1
vote
2
replies
3.2k
views
Calculate Distribution Of Mapped Reads To Transcriptome Assembly
bowtie2
trinity
assembly
transcriptome
updated 10.2 years ago by
hbw
▴ 90 • written 10.2 years ago by
Biojl
★ 1.7k
21
votes
4
replies
5.1k
views
Status Quo: Trinity Vs Oases
rna-seq
trinity
updated 10.5 years ago by
Biostar
20 • written 11.5 years ago by
Biojl
★ 1.7k
1
vote
3
replies
4.3k
views
Biopython And Codeml Module. Error.
biopython
paml
codeml
updated 11.5 years ago by
David W
4.9k • written 11.5 years ago by
Biojl
★ 1.7k
17
votes
9
replies
8.6k
views
Where To Get A Mammalian Phylogenetic Tree With Branch Distances.
tree
phylogenetics
11.5 years ago by
Biojl
★ 1.7k
1
vote
3
replies
2.9k
views
Constructing A Nj Tree From A Binary Matrix With 11 Taxa And 370.000 Characters.
matrix
tree
updated 11.6 years ago by
Josh Herr
5.8k • written 11.6 years ago by
Biojl
★ 1.7k
15
votes
11
replies
7.9k
views
How To Parallelize Codeml With Python
codeml
paml
python
parallel
updated 11.8 years ago by
mgalactus
▴ 770 • written 12.2 years ago by
Biojl
★ 1.7k
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