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0
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replies
225
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Mutual information method for gene markers identification ???
scRNA-seq
mutual-information
updated 4 months ago by
Ram
44k • written 4 months ago by
Ondina
▴ 100
0
votes
1
reply
496
views
PyMOL: how to list all selection names?
pymol
updated 8 months ago by
Wayne
★ 2.0k • written 8 months ago by
Ondina
▴ 100
0
votes
0
replies
2.6k
views
Comment:
Comment: Set up label.color with the same colors as the cluster colors in Seurat DimPlot(
10 months ago by
Ondina
▴ 100
6
votes
7
replies
2.6k
views
Set up label.color with the same colors as the cluster colors in Seurat DimPlot() ?
seurat
scRNA-seq
10 months ago by
Ondina
▴ 100
1
vote
0
replies
2.6k
views
Comment:
Comment: Set up label.color with the same colors as the cluster colors in Seurat DimPlot(
10 months ago by
Ondina
▴ 100
0
votes
1
reply
2.6k
views
Comment:
Comment: Set up label.color with the same colors as the cluster colors in Seurat DimPlot(
10 months ago by
Ondina
▴ 100
1
vote
0
replies
702
views
Comment:
Comment: Samtools sort error: [pretty_header] invalid header
11 months ago by
Ondina
▴ 100
1
vote
1
reply
702
views
Comment:
Comment: Samtools sort error: [pretty_header] invalid header
11 months ago by
Ondina
▴ 100
0
votes
1
reply
702
views
Comment:
Comment: Samtools sort error: [pretty_header] invalid header
11 months ago by
Ondina
▴ 100
4
votes
5
replies
702
views
Samtools sort error: [pretty_header] invalid header
sam
RNA-seq
bam
samtools
updated 11 months ago by
Ram
44k • written 11 months ago by
Ondina
▴ 100
1
vote
0
replies
688
views
Answer:
Answer: MatrisomeDB down?
16 months ago by
Ondina
▴ 100
0
votes
1
reply
688
views
Comment:
Comment: MatrisomeDB down?
16 months ago by
Ondina
▴ 100
3
votes
4
replies
688
views
MatrisomeDB down?
matrisome
database
updated 16 months ago by
GenoMax
142k • written 16 months ago by
Ondina
▴ 100
1
vote
1
reply
690
views
Best method for small cluster (<100 cells) differential expression analysis in single-cell analysis
differential
single-cell
seurat
expression
17 months ago by
Ondina
▴ 100
0
votes
0
replies
2.2k
views
Comment:
Comment: Searching for a way to plot Seurat style equivalent dotplot for gene expression
18 months ago by
Ondina
▴ 100
0
votes
0
replies
2.2k
views
Comment:
Comment: Searching for a way to plot Seurat style equivalent dotplot for gene expression
18 months ago by
Ondina
▴ 100
5
votes
5
replies
2.2k
views
Searching for a way to plot Seurat style equivalent dotplot for gene expression with DESeq on RNA-seq data
dotplot
DESeq
rna-seq
visualisation
18 months ago by
Ondina
▴ 100
12
votes
5
replies
2.3k
views
scRNA-seq: Which is the best method for computing the % of similarity between two clusters using R?
RNAseq
singlecell
clustering
updated 21 months ago by
ahmad mousavi
▴ 800 • written 2.4 years ago by
Ondina
▴ 100
0
votes
0
replies
581
views
Comment:
Comment: GEO Query error
22 months ago by
Ondina
▴ 100
2
votes
2
replies
581
views
GEO Query error
GEOQuery
22 months ago by
Ondina
▴ 100
4
votes
2
replies
1.3k
views
Is there a way to easily export a .mtx file from a seurat object and use it in the scNetViz app for Cytoscape?
conversion
cytoscape
singlecell
format
seurat
updated 23 months ago by
scooter
▴ 620 • written 23 months ago by
Ondina
▴ 100
0
votes
0
replies
586
views
Comment:
Comment: getting a job only with masters degree
2.2 years ago by
Ondina
▴ 100
0
votes
0
replies
2.3k
views
Comment:
Comment: scRNA-seq: Which is the best method for computing the % of similarity between tw
2.4 years ago by
Ondina
▴ 100
0
votes
0
replies
5.5k
views
Comment:
Comment: How to compare two Seurat object (sample) in order to find top markers?
2.4 years ago by
Ondina
▴ 100
2
votes
1
reply
5.5k
views
Answer:
Answer: How to compare two Seurat object (sample) in order to find top markers?
2.6 years ago by
Ondina
▴ 100
2
votes
2
replies
1.1k
views
Volcano 3D plot on single cell seurat data ?
single-cell
volcano3d
seurat
2.5 years ago by
Ondina
▴ 100
1
vote
0
replies
1.1k
views
Answer:
Answer: Volcano 3D plot on single cell seurat data ?
2.5 years ago by
Ondina
▴ 100
0
votes
0
replies
1.6k
views
Comment:
Comment: cellranger count help
2.6 years ago by
Ondina
▴ 100
3
votes
4
replies
3.2k
views
Searching expression for one particular gene in Seurat object issue (Seurat, R)
Seurat
scRNA-seq
R
updated 2.7 years ago by
jared.andrews07
★ 17k • written 2.7 years ago by
Ondina
▴ 100
0
votes
1
reply
3.2k
views
Comment:
Comment: Searching expression for one particular gene in Seurat object issue (Seurat, R)
2.7 years ago by
Ondina
▴ 100
0
votes
0
replies
21k
views
Comment:
Comment: subsetting out cells from seurat object based on expression of 1 gene
2.7 years ago by
Ondina
▴ 100
0
votes
1
reply
21k
views
Comment:
Comment: subsetting out cells from seurat object based on expression of 1 gene
2.7 years ago by
Ondina
▴ 100
0
votes
0
replies
2.8k
views
Comment:
Comment: Filter DGElist object: keep only genes expressed in sample at the same time as a
2.7 years ago by
Ondina
▴ 100
0
votes
1
reply
2.8k
views
Comment:
Comment: Filter DGElist object: keep only genes expressed in sample at the same time as a
2.7 years ago by
Ondina
▴ 100
0
votes
0
replies
2.8k
views
Comment:
Comment: Filter DGElist object: keep only genes expressed in sample at the same time as a
2.7 years ago by
Ondina
▴ 100
0
votes
1
reply
2.8k
views
Comment:
Comment: Filter DGElist object: keep only genes expressed in sample at the same time as a
2.7 years ago by
Ondina
▴ 100
0
votes
1
reply
2.8k
views
Comment:
Comment: Filter DGElist object: keep only genes expressed in sample at the same time as a
updated 2.7 years ago by
GenoMax
142k • written 2.7 years ago by
Ondina
▴ 100
3
votes
9
replies
2.8k
views
Filter DGElist object: keep only genes expressed in sample at the same time as a particular gene of interest
edger
RNA-seq
dgelist
R
2.7 years ago by
Ondina
▴ 100
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