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2.1k
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Comment: Comment: bcftools merge
2.7 years ago by evafinegan • 0
0
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1
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600
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vcf file alternate allele
SNP
updated 2.9 years ago by 43k • written 2.9 years ago by • 0
0
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1
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2.1k
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Comment: Comment: bcftools merge
2.9 years ago by evafinegan • 0
0
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4
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2.1k
views
bcftools merge
SNP
2.7 years ago by evafinegan • 0
0
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0
replies
1.7k
views
Comment: Comment: Inconsistency in SNP calls using bcftools merge for multiple vcf files
2.9 years ago by evafinegan • 0
0
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1
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1.7k
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Comment: Comment: inconsistency in SNP calls using bcftools merge for multiple vcf files
2.9 years ago by evafinegan • 0
0
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1
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1.7k
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Comment: Comment: inconsistency in SNP calls using bcftools merge for multiple vcf files
2.9 years ago by evafinegan • 0
0
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1
reply
1.7k
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Comment: Comment: inconsistency in SNP calls using bcftools merge for multiple vcf files
2.9 years ago by evafinegan • 0
0
votes
8
replies
1.7k
views
Inconsistency in SNP calls using bcftools merge for multiple vcf files
bcftools vcf snp
2.9 years ago by evafinegan • 0
0
votes
0
replies
442
views
missing calls for a vcf file
SNP
2.9 years ago by evafinegan • 0
0
votes
1
reply
513
views
interpretation of vcf calls
SNP
updated 2.9 years ago by 43k • written 2.9 years ago by • 0
1
vote
3
replies
1.2k
views
circular R plot
r
updated 3.0 years ago by 43k • written 3.0 years ago by • 0
0
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1
reply
1.5k
views
Comment: Comment: error on extracting a snp from vcf file using bcftools
3.0 years ago by evafinegan • 0
0
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6
replies
1.5k
views
error on extracting a snp from vcf file using bcftools
snp
updated 3.0 years ago by 9.7k • written 3.0 years ago by • 0
0
votes
1
reply
775
views
how to find a threshold p value for eqtl analysis
matrixeqtl
updated 3.0 years ago by ★ 1.2k • written 3.0 years ago by • 0
0
votes
0
replies
706
views
Error in generating index file using vg index
vg pggb
3.0 years ago by evafinegan • 0
0
votes
1
reply
2.8k
views
Comment: Comment: error in extracting one chromosome from multiple fasta files to a single fasta f
3.0 years ago by evafinegan • 0
0
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1
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2.8k
views
Comment: Comment: error in extracting one chromosome from multiple fasta files to a single fasta f
3.0 years ago by evafinegan • 0
0
votes
1
reply
2.8k
views
Comment: Comment: error in extracting one chromosome from multiple fasta files to a single fasta f
3.0 years ago by evafinegan • 0
1
vote
8
replies
2.8k
views
error in extracting one chromosome from multiple fasta files to a single fasta file
fasta
updated 3.0 years ago by 21k • written 3.0 years ago by • 0
0
votes
1
reply
729
views
Comment: Comment: Error in chopping alignment files for each chromosome
3.1 years ago by evafinegan • 0
1
vote
4
replies
729
views
Error in chopping alignment files for each chromosome
alignment
updated 3.1 years ago by 142k • written 3.1 years ago by • 0
0
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0
replies
821
views
Comment: Comment: problem in creating an object for a list of fasta files
3.1 years ago by evafinegan • 0
1
vote
3
replies
821
views
problem in creating an object for a list of fasta files
basename
3.1 years ago by evafinegan • 0
0
votes
1
reply
778
views
Comment: C: vcf file column name error
3.2 years ago by evafinegan • 0
0
votes
3
replies
778
views
vcf file column name error
sequencing
updated 3.2 years ago by 161k • written 3.2 years ago by • 0
0
votes
0
replies
1.3k
views
Comment: C: downsample vcf error
3.3 years ago by evafinegan • 0
0
votes
4
replies
1.3k
views
downsample vcf error
sequencing
updated 3.3 years ago by 161k • written 3.3 years ago by • 0
0
votes
1
reply
1.4k
views
Comment: C: Error in converting vcf to bed file using bedops
3.3 years ago by evafinegan • 0
3
votes
3
replies
1.4k
views
Error in converting vcf to bed file using bedops
bedops vcf bed
updated 3.3 years ago by 35k • written 3.3 years ago by • 0
0
votes
1
reply
1.0k
views
freebayes not reading the chunks of regions file
snp
updated 3.5 years ago by ▴ 60 • written 3.7 years ago by • 0
0
votes
1
reply
897
views
Comment: C: error in sed usage
3.5 years ago by evafinegan • 0
0
votes
7
replies
897
views
error in sed usage
sequencing
3.5 years ago by evafinegan • 0
0
votes
0
replies
897
views
Comment: C: error in sed usage
3.5 years ago by evafinegan • 0
0
votes
1
reply
897
views
Comment: C: error in sed usage
3.5 years ago by evafinegan • 0
0
votes
0
replies
749
views
how to manage missing data in vcf file
SNP
3.6 years ago by evafinegan • 0
0
votes
2
replies
773
views
converting vcf into simpler version for downstream analysis
SNP
3.6 years ago by evafinegan • 0
0
votes
0
replies
773
views
Comment: C: converting vcf into simpler version for downstream analysis
3.6 years ago by evafinegan • 0
0
votes
0
replies
578
views
Blast2GO : how to select only transcription factors
blast2go
3.6 years ago by evafinegan • 0
0
votes
0
replies
1.6k
views
Comment: C: How to retrieve sequences of genes list at a time from a fasta file
3.6 years ago by evafinegan • 0
0
votes
2
replies
1.6k
views
Comment: C: How to retrieve sequences of genes list at a time from a fasta file
3.6 years ago by evafinegan • 0
1
vote
7
replies
1.6k
views
How to retrieve sequences of genes list at a time from a fasta file
next-gen
3.6 years ago by evafinegan • 0
0
votes
0
replies
1.6k
views
Comment: C: How to retrieve sequences of genes list at a time from a fasta file
3.6 years ago by evafinegan • 0
0
votes
1
reply
1.4k
views
Blast2GO gene ontology terms from a gene list
Gene Ontology
updated 3.6 years ago by • 0 • written 3.6 years ago by • 0
0
votes
0
replies
941
views
Comment: C: linear mixed model for gene expression data in R
3.7 years ago by evafinegan • 0
0
votes
1
reply
941
views
Comment: C: linear mixed model for gene expression data in R
3.7 years ago by evafinegan • 0
0
votes
4
replies
941
views
linear mixed model for gene expression data in R
R
3.7 years ago by evafinegan • 0
0
votes
0
replies
1.3k
views
Comment: C: how to convert a txt file to bed file
3.7 years ago by evafinegan • 0
0
votes
0
replies
1.3k
views
Comment: C: how to convert a txt file to bed file
3.7 years ago by evafinegan • 0
0
votes
1
reply
1.3k
views
Comment: C: how to convert a txt file to bed file
3.7 years ago by evafinegan • 0
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