how to find a threshold p value for eqtl analysis
Hello,
I am doing eqtl analysis using matrixeqtl package in R. I am using a pvalue of 0.05 in the analysis. But I was wondering if I should use a different threshold pvalue? If so, is there a way to calculate an appropriate threshold pvalue? Thank you for the help!
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Zhenyu Zhang
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evafinegan •
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evafinegan •
1 answer
normally ppl calculated empirical p-values with permutations.
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