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mab658
mab658
Reputation:
120
Joined:
7.6 years ago
Last seen:
4.9 years ago
Location:
Nigeria
Latest posts by user
0 votes
0 replies
1.2K views
how to estimate founder and effective population size from snps data in VCF format
snp
updated by GenoMax GenoMax • written by mab658 mab658
1 vote
0 replies
2.6K views
how to obtain imputation accuracy - allelic R2 in beagle
snp beagle
updated by zx8754 zx8754 • written by mab658 mab658
3 votes
2 replies
1.8K views
Obtain VCF format file from imputed dosage format file using beagle2vcf
snp
updated by kas • kas • written by mab658 mab658
0 votes
0 replies
1 view
Comment: C: How to combine chromosome vcf files
written by mab658 mab658
0 votes
0 replies
0 views
Comment: C: Calculate mean_GQ value from individual GQ values in a multi-sample VCF file
written by mab658 mab658
0 votes
1 reply
0 views
Comment: C: how to generate genetic maps from VCF snps data
written by mab658 mab658
0 votes
4 replies
4.4K views
how to generate genetic maps from VCF snps data
sequencing snp
updated by Kevin Blighe Kevin Blighe • written by mab658 mab658
2 votes
1 reply
3.3K views
why filtering sites with allele count below 3
sequencing snp
updated by Jean-Karim Heriche Jean-Karim Heriche • written by mab658 mab658
0 votes
0 replies
0 views
Comment: C: How to filter vcf file on minimum genotype depth and quality for each sample
written by mab658 mab658
0 votes
5 replies
11K views
Conversion of imputed VCF file to HapMap format
rna-seq snp
updated by 15993216250 • 15993216250 • written by mab658 mab658
0 votes
0 replies
0 views
Comment: C: Filtering of low coverage variants from VCF
written by mab658 mab658
0 votes
1 reply
0 views
Comment: C: Imputation of vcf file
written by mab658 mab658
0 votes
2 replies
0 views
Comment: C: Imputation of vcf file
updated by Kevin Blighe Kevin Blighe • written by mab658 mab658
0 votes
2 replies
3.3K views
Conversion of imputed output file from beagle 4.1 to vcf dosage format
rna-seq snp sequencing
updated by Ram Ram • written by mab658 mab658
0 votes
1 reply
0 views
Comment: C: Imputation of vcf file
updated by Kevin Blighe Kevin Blighe • written by mab658 mab658
0 votes
1 reply
0 views
Comment: C: How to include/keep only the samples in a list in VCF.gz file?
written by mab658 mab658
0 votes
1 reply
0 views
Comment: C: Imputation of vcf file
written by mab658 mab658
4 votes
13 replies
11K views
Imputation of vcf file
snp
updated by elielsonveloso • elielsonveloso • written by mab658 mab658
0 votes
1 reply
0 views
Comment: C: filter out subset of samples from vcf file
written by mab658 mab658
2 votes
4 replies
5.0K views
filter out subset of samples from vcf file
snp rna-seq sequencing
updated by Pierre Lindenbaum Pierre Lindenbaum • written by mab658 mab658
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