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Diferences between TCGAbiolinks and cBioportal
R TCGAbiolinks cBioportal
updated 5 months ago by ★ 1.2k • written 5 months ago by ▴ 40
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0
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270
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Genes present in each GO term TCGAvisualize_EAbarplot
TCGAvisualize_EAbarplot R TCGAbiolinks
10 months ago by jomagrax ▴ 40
1
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1
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1.6k
views
Which RcisTarget databases to use in SCENIC
single-cell SCENIC R
updated 18 months ago by ▴ 10 • written 18 months ago by ▴ 40
1
vote
2
replies
638
views
Automatize extraction of a VCF column value
vcf bash
21 months ago by jomagrax ▴ 40
1
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0
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638
views
Answer: Answer: Automatize extraction of a VCF column value
21 months ago by jomagrax ▴ 40
4
votes
1
reply
483
views
Copy a column of a VCF to another column within file
vcf bash
updated 22 months ago by ▴ 910 • written 22 months ago by ▴ 40
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0
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642
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Comment: Comment: Automatize alignment and sorting
23 months ago by jomagrax ▴ 40
6
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3
replies
642
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Automatize alignment and sorting
bash aligment bwa samtools
23 months ago by jomagrax ▴ 40
1
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1
reply
604
views
Can I Illumina sequence with a polymerase that leaves -da overgangs?
sequencing illumina
updated 3.0 years ago by 82k • written 3.0 years ago by ▴ 40
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0
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375
views
Can I differenciate between two variants of the same plant spicies with NGS?
snp genome
3.2 years ago by jomagrax ▴ 40
0
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1
reply
831
views
How to download NCBI nulceotide collection database
ncbi
updated 13 months ago by 43k • written 3.4 years ago by ▴ 40
1
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1
reply
781
views
How to perform GO enrichment analysis on sRNA-seq
GO RNA-Seq
3.9 years ago by jomagrax ▴ 40
1
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0
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781
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Answer: A: How to perform GO enrichment analysis on sRNA-seq
3.9 years ago by jomagrax ▴ 40
1
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4
replies
1.2k
views
Which one of these sRNA prediction tools is better?
RNA-Seq srna
4.2 years ago by jomagrax ▴ 40
0
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1
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1.2k
views
Answer: A: Which one of these sRNA prediction tools is better?
4.2 years ago by jomagrax ▴ 40
1
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0
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5.0k
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Comment: C: Mirdeep2 Error: FASTA reads file is not in accordance with the fasta format spec
4.2 years ago by jomagrax ▴ 40
1
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1
reply
991
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mirdeep2 mapped reference error
RNA-Seq mirdeep2
4.2 years ago by jomagrax ▴ 40
1
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0
replies
991
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Answer: A: mirdeep2 mapped reference error
4.2 years ago by jomagrax ▴ 40
2
votes
15
replies
3.9k
views
How to upgrade R version in ubuntu?
R software error
4.3 years ago by jomagrax ▴ 40
0
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0
replies
3.9k
views
Answer: A: How to upgrade R version in ubuntu?
4.3 years ago by jomagrax ▴ 40
0
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2
replies
3.9k
views
Comment: C: How to upgrade R version in ubuntu?
4.3 years ago by jomagrax ▴ 40
0
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1
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3.9k
views
Comment: C: How to upgrade R version in ubuntu?
4.3 years ago by jomagrax ▴ 40
0
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1
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3.9k
views
Comment: C: How to upgrade R version in ubuntu?
4.3 years ago by jomagrax ▴ 40
0
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0
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3.9k
views
Comment: C: How to upgrade R version in ubuntu?
4.3 years ago by jomagrax ▴ 40
1
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2
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3.9k
views
Comment: C: How to upgrade R version in ubuntu?
4.3 years ago by jomagrax ▴ 40
0
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0
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1.7k
views
Answer: A: Trouble installing mapper.pl from mirdeep2
4.3 years ago by jomagrax ▴ 40
0
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1
reply
1.7k
views
Trouble installing mapper.pl from mirdeep2
mirdeep2 RNA-Seq cap-mirseq
4.3 years ago by jomagrax ▴ 40
0
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2
replies
1.6k
views
ImportError: No module named cutadapt.scripts
rna-seq cutadapt cap-mirseq
4.3 years ago by jomagrax ▴ 40
0
votes
0
replies
707
views
Comment: C: How to define a path to the HTSeq python packages
4.3 years ago by jomagrax ▴ 40
0
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1
reply
707
views
How to define a path to the HTSeq python packages
RNA-Seq CAP-miRSEQ Python
4.3 years ago by jomagrax ▴ 40
0
votes
1
reply
640
views
CAP-miRSeq installation error miRDeep2
miRDeep2 CAP-miRSeq
4.3 years ago by jomagrax ▴ 40
0
votes
1
reply
1.0k
views
ViennaRNA-1.8.4 install error CAP-miRSeq
rna-seq software error CAP-miRSeq ViennaRNA
4.3 years ago by jomagrax ▴ 40
2
votes
2
replies
964
views
Excessive data loss after trimming
genome RNA-Seq
4.3 years ago by jomagrax ▴ 40
0
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0
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708
views
Comment: C: Is It safe to convert .bam to .fastq and re-do the analysis?
4.3 years ago by jomagrax ▴ 40
3
votes
2
replies
708
views
Is It safe to convert .bam to .fastq and re-do the analysis?
alignment rna-seq
4.3 years ago by jomagrax ▴ 40
0
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0
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2.5k
views
Comment: C: Are my .bam files ok?
4.3 years ago by jomagrax ▴ 40
3
votes
4
replies
2.5k
views
Are my .bam files ok?
alignment
updated 4.3 years ago by 142k • written 4.3 years ago by ▴ 40
2
votes
1
reply
3.1k
views
How to join DESeq2 object "res" to the gene annotation with dplyr?
R RNA-Seq
updated 5.2 years ago by ★ 5.1k • written 5.2 years ago by ▴ 40
0
votes
1
reply
2.9k
views
TopGO Error in .local(.Object, ...) : allGenes must be a factor with 2 levels
RNA-Seq R TopGO
5.4 years ago by jomagrax ▴ 40
0
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1
reply
1.7k
views
Comment: C: How to compare several ASCII files in LINUX
5.5 years ago by jomagrax ▴ 40
0
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1
reply
1.7k
views
Comment: C: How to compare several ASCII files in LINUX
updated 5.5 years ago by 43k • written 5.5 years ago by ▴ 40
0
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1
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1.7k
views
Comment: C: How to compare several ASCII files in LINUX
5.5 years ago by jomagrax ▴ 40
0
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1
reply
1.7k
views
Comment: C: How to compare several ASCII files in LINUX
5.5 years ago by jomagrax ▴ 40
13
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15
replies
1.7k
views
How to compare several ASCII files in LINUX
rna-seq LINUX
5.5 years ago by jomagrax ▴ 40
0
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2
replies
1.7k
views
Comment: C: How to compare several ASCII files in LINUX
5.5 years ago by jomagrax ▴ 40
0
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1
reply
1.7k
views
Comment: C: How to compare several ASCII files in LINUX
5.5 years ago by jomagrax ▴ 40
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