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546
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Which fasta files are assembled transcripts IDBA_tran assembler ?
RNA-Seq Assembly
updated 5 weeks ago by • 0 • written 3.9 years ago by ▴ 980
3
votes
2
replies
844
views
How to download Time Calibration Data for Phylogenetic tree estimation ?
gene DNA RNA
updated 8 months ago by ▴ 30 • written 3.0 years ago by ▴ 980
0
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0
replies
367
views
How do I filter the annotated genome ?
protein genome gene
15 months ago by sunnykevin97 ▴ 980
0
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0
replies
818
views
Comment: Comment: Duplication genes in Mitochondrial genome ?
18 months ago by sunnykevin97 ▴ 980
0
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0
replies
452
views
Comment: Comment: D-loop in mitogenomes?
18 months ago by sunnykevin97 ▴ 980
0
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0
replies
713
views
How to generate Kimura substitution level plots for TE (transposable elements) ?
gene genome protein
19 months ago by sunnykevin97 ▴ 980
0
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1
reply
452
views
D-loop in mitogenomes?
gene genome protein
18 months ago by sunnykevin97 ▴ 980
0
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0
replies
6.4k
views
Comment: Comment: Blast e-value 0E0
21 months ago by sunnykevin97 ▴ 980
0
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1
reply
501
views
Tools for finding the duplications in genomes for phylogenomics study ?
gene genome protein
updated 21 months ago by • 0 • written 21 months ago by ▴ 980
1
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1
reply
4.3k
views
Comment: Comment: Which hg38 file?
21 months ago by sunnykevin97 ▴ 980
0
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1
reply
818
views
Comment: Comment: Duplication genes in Mitochondrial genome ?
21 months ago by sunnykevin97 ▴ 980
0
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2
replies
4.3k
views
Comment: Comment: Which hg38 file?
21 months ago by sunnykevin97 ▴ 980
1
vote
3
replies
818
views
Duplication genes in Mitochondrial genome ?
gene genome protein
18 months ago by sunnykevin97 ▴ 980
8
votes
1
reply
674
views
Visualization tools for viewing the genes orientation in the mitogenomes
gene genome protein
updated 21 months ago by ★ 1.2k • written 21 months ago by ▴ 980
2
votes
0
replies
2.2k
views
Comment: Comment: Error: missing values and NaN's not allowed if 'na.rm' is FALSE
21 months ago by sunnykevin97 ▴ 980
0
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1
reply
2.2k
views
Comment: Comment: Error: missing values and NaN's not allowed if 'na.rm' is FALSE
21 months ago by sunnykevin97 ▴ 980
0
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0
replies
2.2k
views
Comment: Comment: Error: missing values and NaN's not allowed if 'na.rm' is FALSE
21 months ago by sunnykevin97 ▴ 980
7
votes
4
replies
2.2k
views
Error: missing values and NaN's not allowed if 'na.rm' is FALSE
Genome Software
21 months ago by sunnykevin97 ▴ 980
1
vote
1
reply
643
views
Comment: Comment: parsing the output in to a table format ?
22 months ago by sunnykevin97 ▴ 980
11
votes
3
replies
643
views
parsing the output in to a table format ?
gene aw genome protein
updated 22 months ago by 4.6k • written 22 months ago by ▴ 980
0
votes
1
reply
554
views
Tools for functional annotation of nucleotide and amino acid sequences ?
gene genome protein
updated 21 months ago by ▴ 30 • written 22 months ago by ▴ 980
2
votes
0
replies
712
views
Comment: Comment: Parsing the codeml output in nice format?
22 months ago by sunnykevin97 ▴ 980
2
votes
2
replies
712
views
Parsing the codeml output in nice format?
gene genome protein
22 months ago by sunnykevin97 ▴ 980
0
votes
0
replies
455
views
Running Paml (CODEML) on batch mode ?
gene genome protein
22 months ago by sunnykevin97 ▴ 980
2
votes
0
replies
496
views
Comment: Comment: How do I run pal2nal.pl in batch mode ?
22 months ago by sunnykevin97 ▴ 980
2
votes
0
replies
16k
views
Comment: Comment: How To Do Alignment, Stop Codon Removal And Dn/Ds Calulation In One Go?
22 months ago by sunnykevin97 ▴ 980
0
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0
replies
1.0k
views
Comment: Comment: Translation table for annotating fish genomes ?
22 months ago by sunnykevin97 ▴ 980
0
votes
1
reply
1.0k
views
Comment: Comment: Translation table for annotating fish genomes ?
22 months ago by sunnykevin97 ▴ 980
0
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1
reply
1.0k
views
Comment: Comment: Translation table for annotating fish genomes ?
22 months ago by sunnykevin97 ▴ 980
0
votes
6
replies
1.0k
views
Translation table for annotating fish genomes ?
gene genome protein
22 months ago by sunnykevin97 ▴ 980
0
votes
0
replies
382
views
How to choose the substitution models for each partition ?
gene genome protein
22 months ago by sunnykevin97 ▴ 980
0
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0
replies
1.1k
views
Comment: Comment: How to extract fasta subsequences from a multiline fasta file which has very lon
22 months ago by sunnykevin97 ▴ 980
2
votes
1
reply
1.1k
views
Comment: Comment: How to extract fasta subsequences from a multiline fasta file which has very lon
22 months ago by sunnykevin97 ▴ 980
8
votes
7
replies
1.1k
views
How to extract fasta subsequences from a multiline fasta file which has very long headers ?
gene genome protein
22 months ago by sunnykevin97 ▴ 980
0
votes
0
replies
1.1k
views
Comment: Comment: How to extract fasta subsequences from a multiline fasta file which has very lon
22 months ago by sunnykevin97 ▴ 980
0
votes
1
reply
9.2k
views
Comment: Comment: How do I extract Fasta Sequences based on a list of IDs?
22 months ago by sunnykevin97 ▴ 980
0
votes
0
replies
317
views
How to extract the CDS from a fasta file using the protein IDS ?
gene genome protein
22 months ago by sunnykevin97 ▴ 980
4
votes
4
replies
752
views
Why less Orthologs - can give enough information ?
gene genome protein
22 months ago by sunnykevin97 ▴ 980
0
votes
0
replies
752
views
Comment: Comment: Why less Orthologs - can give enough information ?
22 months ago by sunnykevin97 ▴ 980
3
votes
2
replies
741
views
Mauve - bacterial genome viewer?
Genome Software
22 months ago by sunnykevin97 ▴ 980
0
votes
0
replies
741
views
Answer: Answer: Mauve - bacterial genome viewer?
22 months ago by sunnykevin97 ▴ 980
0
votes
0
replies
7.0k
views
Comment: Comment: Hard-masked or soft-masked genome
23 months ago by sunnykevin97 ▴ 980
9
votes
2
replies
566
views
Repeat Masking step is really important on Low coverage genomes (~9x-30X) ?
gene genome protein
updated 23 months ago by ▴ 210 • written 23 months ago by ▴ 980
2
votes
0
replies
1.5k
views
Comment: Comment: Difference b/w primary and alternate genome assembly ?
23 months ago by sunnykevin97 ▴ 980
9
votes
3
replies
709
views
How do I extract a fasta sequence using the specific keyword (**Psychro**) ?
protein gene genome
written 23 months ago by ▴ 980
0
votes
0
replies
9.2k
views
Comment: Comment: How do I extract Fasta Sequences based on a list of IDs?
23 months ago by sunnykevin97 ▴ 980
2
votes
0
replies
709
views
Comment: Comment: How do I extract a fasta sequence using the specific keyword (**Psychro**) ?
23 months ago by sunnykevin97 ▴ 980
2
votes
2
replies
1.6k
views
Comment: Comment: ncbi-genome-download - bacterial and viral genomes ?
23 months ago by sunnykevin97 ▴ 980
20
votes
5
replies
1.6k
views
ncbi-genome-download - bacterial and viral genomes ?
protein gene genome
updated 23 months ago by ▴ 210 • written 23 months ago by ▴ 980
0
votes
0
replies
1.1k
views
Comment: Comment: Removing bacterial sequences from assembled eukaryotic draft genomes ?
23 months ago by sunnykevin97 ▴ 980
266 results • Page 1 of 6
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