Tools for finding the duplications in genomes for phylogenomics study ?
Hi,
Are there any good pipelines or tools which can predict the duplications from the CDS sequences ?
I know orthofinder reports the duplication sequences, I'm looking for other tools which can be done easily.
Suggestions appreciated
• 846 views
•
link
updated
by
pinn •
•
written
by
sunnykevin97
•
written
by
sunnykevin97
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Mapping ~100-300bp Sequences to Metagenome-Assembled Genomes
written by chemokine-1 •
-
Visualization tools for viewing the genes orientation in the mitogenomes
written by sunnykevin97
-
Tools for functional annotation of nucleotide and amino acid sequences ?
written by sunnykevin97
-
Removing bacterial sequences from assembled eukaryotic draft genomes ?
written by sunnykevin97
-
Multiple sequence alignment tools for bigdata genomics ?
written by sunnykevin97
-
how to extract coding sequences (CDS) from a bam file or vcf file ?
written by sunnykevin97
-
How to predict receptors of a ligand?
written by liux.bio
-
de novo metatranscriptomics pipelines for soil
written by stevebaeyen •
-
Assembling sequence data generated by RADseq
written by shynilasanthi •
-
Surface Amino-Acid From Sequence Only
written by Sheila
Orthofinder, Orthoscope, blastp all vs. all.