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thomas.welch
thomas.welch
Reputation:
50
Joined:
9.8 years ago
Last seen:
2.1 years ago
Location:
United Kingdom
Latest posts by user
0 votes
1 reply
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Comment: Comment: Prinseq lite data preprocessing
written by thomas.welch • thomas.welch
0 votes
1 reply
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Comment: Comment: Prinseq lite data preprocessing
written by thomas.welch • thomas.welch
0 votes
0 replies
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Comment: Comment: Reconcile reference transcriptome with reference genome from different labs with
written by thomas.welch • thomas.welch
0 votes
1 reply
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Comment: Comment: Reconcile reference transcriptome with reference genome from different labs with
written by thomas.welch • thomas.welch
0 votes
4 replies
1.5K views
Reconcile reference transcriptome with reference genome from different labs with different naming schemes
proteomics transcriptomics transcdecoder annotation
updated by GenoMax GenoMax • written by thomas.welch • thomas.welch
0 votes
1 reply
2.2K views
GVCF vs VCF INFO tags, relevance for filtering RNAseq SNPs
vcf snps gvcf gatk
updated by Pierre Lindenbaum Pierre Lindenbaum • written by thomas.welch • thomas.welch
0 votes
0 replies
713 views
RNAseq SNP discovery: deciding upon filters and dealing with allele expression bias
snp rnaseq transciptomics filtering gatk
written by thomas.welch • thomas.welch
0 votes
1 reply
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Comment: Comment: generating transcript to gene mapping with unhelpful GFF3 file
written by thomas.welch • thomas.welch
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4 replies
2.6K views
generating transcript to gene mapping with unhelpful GFF3 file
salmon rnaseq transcriptome gff3
updated by jayeshkumarsundaram • jayeshkumarsundaram • written by thomas.welch • thomas.welch
1 vote
0 replies
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Comment: Comment: reporting differentially expressed genes in a global RNA-seq study
written by thomas.welch • thomas.welch
0 votes
2 replies
1.4K views
Forum: reporting differentially expressed genes in a global RNA-seq study
deseq2 rna-seq expression heatmaps transcriptomics
written by thomas.welch • thomas.welch
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0 replies
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Comment: C: Is there a way to get the name or IDs of genes with the goseq table?
written by thomas.welch • thomas.welch
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2 replies
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Comment: C: Is there a way to get the name or IDs of genes with the goseq table?
written by thomas.welch • thomas.welch
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1 reply
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Answer: A: Retrieving GO mappings for GOseq analysis with non-native organism
written by thomas.welch • thomas.welch
3 votes
6 replies
4.8K views
Retrieving GO mappings for GOseq analysis with non-native organism
gene ontology goseq topgo gaf gff
updated by Thi Thu Trang • Thi Thu Trang • written by thomas.welch • thomas.welch
1 vote
1 reply
0 views
Comment: C: Hisat2 aligner problem
written by thomas.welch • thomas.welch
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0 replies
2.2K views
IGV indels not included in consensus sequence
igv indels consensus sequence alignment ngs
updated by Biostar Biostar • written by thomas.welch • thomas.welch
0 votes
7 replies
7.8K views
merging a number of overlapping sanger sequences
merge sequence alignment
updated by ferroao • ferroao • written by thomas.welch • thomas.welch
0 votes
2 replies
1.8K views
large deletion detection in a haploid microbial eukaryote
structural variant haploid microbial sequencing
updated by Brian Bushnell Brian Bushnell • written by thomas.welch • thomas.welch
0 votes
1 reply
2.1K views
multiple sequence alignment for validation of large indels
multiple-sequence-alignment cnvnator indels
updated by Ram Ram • written by thomas.welch • thomas.welch
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