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Comment: Comment: Need some help to develop some python code to analyze kmer data
3 months ago by schlogl ▴ 160
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2
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346
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Need some help to develop some python code to analyze kmer data
Python R
3 months ago by schlogl ▴ 160
1
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0
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1.2k
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Answer: Answer: How to use efetch to download genome/proteome/etc. at the command line?
6 months ago by schlogl ▴ 160
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0
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865
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Comment: Comment: Counting distance between kmer instances in a sequence
8 months ago by schlogl ▴ 160
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6.9k
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Comment: Comment: Can't locate Bio/SeqIO.pm - path error?
9 months ago by schlogl ▴ 160
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0
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2.8k
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Comment: Comment: Finding 16 mer not present in GRCh38
9 months ago by schlogl ▴ 160
5
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2
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865
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Counting distance between kmer instances in a sequence
kmers python inter-distance R
8 months ago by schlogl ▴ 160
0
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0
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371
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Using jellyfish in a slide window analysis
samtools jellyfish slidewindow
10 months ago by schlogl ▴ 160
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0
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627
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Comment: Comment: Using TRF in multiple files
10 months ago by schlogl ▴ 160
2
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3
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627
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Using TRF in multiple files
tandem TRF repeats
10 months ago by schlogl ▴ 160
3
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3
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1.6k
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Getting a curl: (22) The requested URL returned error: 500 ERROR
ncbi
updated 13 months ago by 43k • written 14 months ago by ▴ 160
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0
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1.6k
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Comment: Comment: Getting a curl: (22) The requested URL returned error: 500 ERROR
14 months ago by schlogl ▴ 160
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0
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1.6k
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Comment: Comment: Getting a curl: (22) The requested URL returned error: 500 ERROR
14 months ago by schlogl ▴ 160
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0
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4.4k
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Comment: Comment: CAI in python: SeqUtils.CodonUsage vs CAI package
14 months ago by schlogl ▴ 160
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0
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958
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Comment: Comment: Alien-hunter outputs
15 months ago by schlogl ▴ 160
2
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4
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958
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Alien-hunter outputs
alien-hunter
15 months ago by schlogl ▴ 160
1
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1
reply
958
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Answer: Answer: Alien-hunter outputs
15 months ago by schlogl ▴ 160
0
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0
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958
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Comment: Comment: Alien-hunter outputs
15 months ago by schlogl ▴ 160
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0
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546
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Comment: Comment: Frequency of a trinucleotide normalized by synonymous codons
15 months ago by schlogl ▴ 160
2
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2
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546
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Frequency of a trinucleotide normalized by synonymous codons
synonymous codons
15 months ago by schlogl ▴ 160
1
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0
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365
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Statistics for large k-mers with low counts
genomes k-mers statistics
20 months ago by schlogl ▴ 160
1
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3
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944
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Looking for a example of using bedtools nuc in many fasta files
bedtools
20 months ago by schlogl ▴ 160
1
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0
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944
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Answer: Answer: Looking for a example of using bedtools nuc in many fasta files
20 months ago by schlogl ▴ 160
0
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0
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944
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Comment: Comment: Looking for a example of using bedtools nuc in many fasta files
20 months ago by schlogl ▴ 160
0
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1
reply
1.4k
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Comment: Comment: Splitting Gbff files
21 months ago by schlogl ▴ 160
3
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3
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1.4k
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Splitting Gbff files
Gbff
updated 21 months ago by 100k • written 21 months ago by ▴ 160
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0
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4.9k
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Comment: Comment: About calculating the GC content in a sliding window
22 months ago by schlogl ▴ 160
1
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1
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1.2k
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Comment: Comment: 'Can someone give me a direction on how to draw a figure like this one of dinucl
2.4 years ago by schlogl ▴ 160
1
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0
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1.2k
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Comment: Comment: Can someone give me a direction on how to draw a figure like this one?
2.4 years ago by schlogl ▴ 160
11
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5
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1.2k
views
'Can someone give me a direction on how to draw a figure like this one of dinucleotide frequency distribution pattern of genomes'?
plots
updated 2.4 years ago by ★ 2.5k • written 2.4 years ago by ▴ 160
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1
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112k
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Comment: Comment: Convertion Of Gff3 To Gtf
2.4 years ago by schlogl ▴ 160
0
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0
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1.1k
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Comment: Comment: Get gene sequence for oragnism using python
2.7 years ago by schlogl ▴ 160
0
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1
reply
1.1k
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Comment: Comment: Get gene sequence for oragnism using python
2.7 years ago by schlogl ▴ 160
1
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0
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2.8k
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Comment: Comment: Finding 16 mer not present in GRCh38
2.7 years ago by schlogl ▴ 160
0
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1
reply
6.0k
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Comment: Comment: k-mer finding and counting
2.9 years ago by schlogl ▴ 160
0
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0
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1.0k
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Have a question about run jellyfish in many directories with different number of zipped fasta files
bash
2.9 years ago by schlogl ▴ 160
0
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0
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3.5k
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Comment: Comment: specific k-mer count in multi fasta file
2.9 years ago by schlogl ▴ 160
0
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1
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3.5k
views
Comment: Comment: specific k-mer count in multi fasta file
2.9 years ago by schlogl ▴ 160
0
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0
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1.3k
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Comment: Comment: Comparing genomes against randomized genomes
3.0 years ago by schlogl ▴ 160
0
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0
replies
1.3k
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Comment: Comment: Comparing genomes against randomized genomes
3.0 years ago by schlogl ▴ 160
2
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6
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1.3k
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Comparing genomes against randomized genomes
sequence genomes
3.0 years ago by schlogl ▴ 160
0
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0
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1.3k
views
Comment: Comment: Comparing genomes against randomized genomes
3.0 years ago by schlogl ▴ 160
4
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2
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667
views
R or Python packages to work with SNPs
snp
updated 3.3 years ago by ▴ 180 • written 3.3 years ago by ▴ 160
0
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0
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871
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Comment: C: Programmatically retrieving taxon classification
3.3 years ago by schlogl ▴ 160
0
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0
replies
871
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Comment: C: Programmatically retrieving taxon classification
3.3 years ago by schlogl ▴ 160
6
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5
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871
views
Programmatically retrieving taxon classification
sequence
updated 3.3 years ago by ▴ 490 • written 3.3 years ago by ▴ 160
0
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1
reply
138k
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Comment: C: Useful Bash Commands To Handle Fasta Files
3.3 years ago by schlogl ▴ 160
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0
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1.0k
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Comment: C: DNA stadistical studies- Local Base Composition Code
3.7 years ago by schlogl ▴ 160
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0
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1.0k
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Comment: C: DNA stadistical studies- Local Base Composition Code
3.7 years ago by schlogl ▴ 160
0
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1
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1.5k
views
Comment: C: I am trying to select some reference genome region of a bam file, but got an err
3.7 years ago by schlogl ▴ 160
128 results • Page 1 of 3
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