This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Abdul Rafay Khan
Abdul Rafay Khan
Reputation:
1,220
Joined:
11.8 years ago
Last seen:
4.5 years ago
Location:
Karachi, PK

Contact: alrafaykhan@gmail.com

Latest posts by user
0 votes
1 reply
972 views
Extract all snps of particular gene/genes from dbSNP using linux ?
snps
updated by cpad0112 cpad0112 • written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
1 reply
1.7K views
Add sample number/name column to VEP result
vep vcf
updated by Emily Emily • written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
1 reply
1.5K views
Multi samples VCF file manipulation
vcf
written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
0 replies
0 views
Comment: C: LOD Score NaN Error
written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
4 replies
2.0K views
How to perform fst test using SNPs frequency?
snp fst
written by Abdul Rafay Khan Abdul Rafay Khan
1 vote
2 replies
1.7K views
LOD Score NaN Error
lod score r paramlink
updated by zx8754 zx8754 • written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
1 reply
712 views
How to perform fst test using SNPs frequency?
fst frequency snp
written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
1 reply
0 views
Comment: C: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
2 replies
1.3K views
How to convert population SNPs frequency data into Plink format?
plink snp
written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
1 reply
1.1K views
Minor allele frequency and fst test
fst maf
written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
0 replies
1.4K views
How do I calculate the haplotype frequencies in 1000 genome populations
haplotype 1000 genome populations frequencies
written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
1 reply
2.2K views
Principal components analysis of SNP data
pca snp principal components
written by Abdul Rafay Khan Abdul Rafay Khan
2 votes
1 reply
0 views
Comment: C: Calculate the allele frequency of specific sub-population using VEP
written by Abdul Rafay Khan Abdul Rafay Khan
2 votes
1 reply
0 views
Comment: C: List of genes TO starting and ending bps USING biomaRt R
written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
4 replies
3.4K views
Calculate the allele frequency of specific sub-population using VEP
vep allele frequency
updated by Emily Emily • written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
3 replies
1.7K views
List of genes TO starting and ending bps USING biomaRt R
biomart r
written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
3 replies
2.7K views
Gerp++ installation error
gerp gerp++ snp gerp2
updated by musha • musha • written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
0 replies
1 view
Comment: C: GATK gradlew bundle Error
written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
2 replies
2.1K views
GATK gradlew bundle Error
software error gatk
updated by dariober dariober • written by Abdul Rafay Khan Abdul Rafay Khan
0 votes
1 reply
2.1K views
GATK (Cannot find '.git' directory)
gatk
written by Abdul Rafay Khan Abdul Rafay Khan
Latest awards to user
TODO: Awards