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Comment: Comment: How to normalise RNA seq data from two independent experiments to the same scale
9 weeks ago by Mo ▴ 40
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1
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402
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Comment: Comment: How to normalise RNA seq data from two independent experiments to the same scale
9 weeks ago by Mo ▴ 40
1
vote
5
replies
402
views
How to normalise RNA seq data from two independent experiments to the same scale.
RNAseq
updated 9 weeks ago by ★ 1.8k • written 9 weeks ago by ▴ 40
4
votes
6
replies
1.8k
views
6 follow
How to discard alignments from SAM/BAM file that have mismatches
BAM SAM minimap nanopore
updated 6 months ago by 20k • written 10 months ago by ▴ 40
0
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0
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553
views
Comment: Comment: How to sort cd-hit-est cluster file
7 months ago by Mo ▴ 40
1
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4
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553
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How to sort cd-hit-est cluster file
sort cd-hit-est
7 months ago by Mo ▴ 40
0
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0
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553
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Comment: Comment: How to sort cd-hit-est cluster file
7 months ago by Mo ▴ 40
0
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0
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502
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Comment: Comment: Modify the code to take most abundant reads from a cluster and process it.
7 months ago by Mo ▴ 40
0
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2
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502
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Modify the code to take most abundant reads from a cluster and process it.
cd-hit-est clustering
7 months ago by Mo ▴ 40
0
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0
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1.8k
views
Comment: Comment: Which minimap2 parameters to set while performing mapping to avoid such mismatch
8 months ago by Mo ▴ 40
1
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1
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1.8k
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Comment: Comment: Which minimap2 parameters to set while performing mapping to avoid such mismatch
8 months ago by Mo ▴ 40
0
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0
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1.8k
views
Comment: Comment: Which minimap2 parameters to set while performing mapping to avoid such mismatch
8 months ago by Mo ▴ 40
0
votes
1
reply
1.8k
views
Comment: Comment: Which minimap2 parameters to set while performing mapping to avoid such mismatch
8 months ago by Mo ▴ 40
4
votes
9
replies
1.8k
views
Which minimap2 parameters to set while performing mapping to avoid such mismatches
minimap2
8 months ago by Mo ▴ 40
1
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0
replies
1.8k
views
Comment: Comment: How to discard alignments from SAM/BAM file that have mismatches
10 months ago by Mo ▴ 40
0
votes
0
replies
1.8k
views
Comment: Comment: How to discard alignments from SAM/BAM file that have mismatches
10 months ago by Mo ▴ 40
0
votes
2
replies
990
views
guppy basecaller giving error while basecalling
base-calling guppy nanopore fast5
updated 10 months ago by 9.7k • written 10 months ago by ▴ 40
1
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1
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925
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Reads with highest MAPQ values from SAM files are showing mismatches to reference sequence and IGV classified them as supplementary reads
minimap Nanopore IGV
updated 11 months ago by 142k • written 11 months ago by ▴ 40
11
votes
4
replies
1.2k
views
how to sort a fasta file
fasta
updated 11 months ago by 161k • written 11 months ago by ▴ 40
0
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0
replies
2.2k
views
Comment: Comment: minimap's SAM file MAPQ value for the unique alignments
11 months ago by Mo ▴ 40
0
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3
replies
2.2k
views
minimap's SAM file MAPQ value for the unique alignments
minimap MAPQ RNAseq
11 months ago by Mo ▴ 40
0
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0
replies
1.0k
views
Comment: Comment: IGV grey vs white lines
11 months ago by Mo ▴ 40
0
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2
replies
1.0k
views
IGV grey vs white lines
minimap nanopore IGV
updated 11 months ago by 142k • written 11 months ago by ▴ 40
0
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0
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655
views
Comment: Comment: How to extract out gene specific reads from concatenated fastq file
11 months ago by Mo ▴ 40
0
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3
replies
655
views
How to extract out gene specific reads from concatenated fastq file
fastq gene-specific RNA-seq nanopore
11 months ago by Mo ▴ 40
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