2
votes
0
replies
1.1k
views
7
votes
1
reply
1.0k
views
updated 3.0 years ago by
Istvan Albert
100k
•
written 3.0 years ago by
Biostar
2.8k
3
votes
1
reply
894
views
1
vote
2
replies
888
views
updated 2.3 years ago by
Mensur Dlakic
★
27k
•
written 2.3 years ago by
Biostar
2.8k
1
vote
0
replies
851
views
3
votes
0
replies
849
views
5
votes
1
reply
847
views
3
votes
0
replies
832
views
1
vote
0
replies
812
views
2
votes
2
replies
807
views
updated 2.0 years ago by
Istvan Albert
100k
•
written 2.1 years ago by
Biostar
2.8k
2
votes
1
reply
805
views
2
votes
0
replies
786
views
4
votes
1
reply
769
views
3
votes
0
replies
760
views
1
vote
1
reply
742
views
updated 2.4 years ago by
Jeremy Leipzig
22k
•
written 2.4 years ago by
Biostar
2.8k
2
votes
0
replies
739
views
1
vote
0
replies
734
views
4
votes
1
reply
727
views
1
vote
0
replies
723
views
5
votes
0
replies
717
views
2
votes
0
replies
716
views
2
votes
0
replies
715
views
2
votes
1
reply
714
views
3
votes
0
replies
712
views
3
votes
0
replies
708
views
updated 2.6 years ago by
Istvan Albert
100k
•
written 2.6 years ago by
Biostar
2.8k
2
votes
0
replies
704
views
2
votes
0
replies
699
views
5
votes
0
replies
699
views
updated 2.9 years ago by
Istvan Albert
100k
•
written 2.9 years ago by
Biostar
2.8k
3
votes
0
replies
698
views
7
votes
1
reply
690
views
2
votes
0
replies
677
views
1
vote
0
replies
672
views
2
votes
1
reply
669
views
2
votes
0
replies
668
views
1
vote
0
replies
668
views
0
votes
0
replies
664
views
5
votes
0
replies
664
views
2
votes
0
replies
660
views
2
votes
0
replies
653
views
3
votes
0
replies
653
views
updated 22 months ago by
Istvan Albert
100k
•
written 22 months ago by
Biostar
2.8k
3
votes
0
replies
652
views
3
votes
0
replies
646
views
1
vote
0
replies
646
views
2
votes
0
replies
645
views
1
vote
0
replies
644
views
1
vote
0
replies
642
views
2
votes
1
reply
641
views
updated 17 months ago by
Istvan Albert
100k
•
written 17 months ago by
Biostar
2.8k
3
votes
0
replies
640
views
2
votes
0
replies
637
views
3
votes
0
replies
636
views
Recent Votes
Recent Locations •
All
United States, just now
United States, just now
Brazil, 1 minute ago
United States, 2 minutes ago
United States, 3 minutes ago
United States, 3 minutes ago
Italy, 5 minutes ago
Recent Awards •
All
Popular Question to
manaswwm
▴
510
Popular Question to
Raghad
•
0
Scholar to
Pierre Lindenbaum
161k
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
scideas
▴
30
Popular Question to
Muhammad
•
0
Recent Replies
Answer: How to find identical sequences in genome fasta file (by Python or any possible
by
GenoMax
142k
> My final purpose are find and remove any identical sequences present in my genome fasta file.
You can use `clumpify.sh` from BBMap suite…
Comment: GO analysis: Indicate genes corresponding to the pathway
by
marco.barr
▴
130
I think you have set a filter to get these pahways upstream from the DEG results. You should extract the IDs or names of the genes that you…
Comment: GATK Structural Variants Pipeline - Steps
by
Bioinformatics_begginner
▴
20
Thank you for the response, I mean those tools aren't all the steps from fasta to vcf. Would be key understanding the aligner, reference us…
Comment: seqtk subseq in.fastq list.txt > out.fastq not extracting full sequence from
by
GenoMax
142k
Please accept the answer (green check mark) to provide closure to this thread.
Answer: GATK Structural Variants Pipeline - Steps
by
Pierre Lindenbaum
161k
> A structural variation pipeline for short-read sequencing
https://github.com/broadinstitute/gatk-sv
Comment: GATK Structural Variants Pipeline - Steps
by
DGTool
▴
20
If it is just the tools that they used which you are looking for, the first link in the overview section of that page leads to the followin…
Comment: GO analysis: p-value range
by
Matthias Zepper
4.6k
It is just a warning that you add a new scale to a ggplot2 plot, that already has an existing one, which will get replaced. Nothing to worr…
Comment: GO analysis: p-value range
by
marco.barr
▴
130
If you write me the code you used I can help you more
Comment: GO analysis: p-value range
by
sooni
▴
20
When I run the code, the following message appears:
Scale for y is already present.
Adding another scale for y, which will replace…
Comment: Why most genes have high padj values
by
mnx0723
•
0
In the case of other samples, the total number of genes is at least 3,000 more than that one, but it seems to be a relatively small number.…
Comment: How to hide label in layout file of MCscan (python version)
by
jinyi
•
0
Command line is as follows:
python -m jcvi.graphics.synteny Cs.Cm.i1.blocks Cs_Cm.bed layout2.txt
Comment: Add stats to the plot
by
marco.barr
▴
130
Thank you, it seems to be clearer. Your Condition already has two factorial levels. You can replace these names in groups 1 and 2.
da…
Comment: Error in using BioSampleParser tool: subscript out of bounds
by
marco.barr
▴
130
Hi, I also had the same problem. If you check its github page there have been no releases for many years and these errors cannot be fixed. …
Comment: Add stats to the plot
by
Ghada
•
0
Thanks, thats really helpful
![enter image description here][1]
![enter image description here][2]
[1]: /media/images/0470f3dc-5945-…
Comment: PCA Visualization error in R
by
marco.barr
▴
130
SNPRelate is an R package that is able to read from VCF files directly and perform PCA and IBD/IBS. See the documentation for details in Bi…
Traffic: 1915 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6