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How to obtain spliced and unspliced counts from parse biosciences generated count data ?

I am trying to figure how to obtain spliced and unspliced counts from count matrix generated by parse biosciences kit ? I need it for RNA-velocity analysis.

scrnaseq transcriptomics single-cell

1 answer

It is not possible to get spliced/unspliced counts from a count matrix, you need fastq files or bam files.

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