Nextflow Stringtie: command not found Error
Im trying to use stringtie in my nextflow pipeline and I've tried to write the stringtie code and have gotten this error. Im not sure how to correct this.
Any help would be greatly appreciated!
• 1,432 views
•
link
updated
by
ATpoint
•
written
by
selenaajohn •
•
written
by
selenaajohn •
1 answer
Log in to answer this question.
More posts like this
-
StringTie fails with “Fatal error: Exit code 1” when using GFF3 annotation for a non-model halophyte
written by Chamara Lakshitha •
-
Analyzing PBMC scATAC-seq Using Signac Error
written by Sohum •
-
Autodock Vina not recognizing Chloride ion in ligand.pqbqt file
written by Sanjukta •
-
CIBERSORTx error (error in rep(2, size * length(cells) -1)) : invalid 'times' argument
written by Mr. George •
-
Differential Accessibility
written by shlo12 •
-
Differential accessibility using DiffBinf
written by shlo12 •
-
FastQ file not recognized by hisat2 allignment
written by selenaajohn •
-
Problem after filtering vcf files
written by yoser4 •
-
Cytoscape Tetramer Error Without Hints
written by 630720255 •
-
non-unique values when setting 'row.names' error in DESeq2
written by Sai Prasada •
It's bad practice to delete posts that received an answer ( = a user invested time - in this case me but it of course applies generally). Don't do that again.