how to install convertf using a conda environment · Biostar

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how to install convertf using a conda environment

Hi guys, I need to convert files from eigenstrat format to plink format. I read on the internet that this may be possible using the software convertf https://reich.hms.harvard.edu/software/InputFileFormats. However, I don't know how to download this software. Is it possible to do it after creating a conda environment?

Thank u so much!

convertf conda

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updated 4.1 years ago by 4galaxy77

• written 4.1 years ago by Khaleesi95 •

I'd strongly recommend using the admixtools R library - it's vastly more user friendly and you can use your eigenstrat/plink files directly https://github.com/uqrmaie1/admixtools

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written 4.1 years ago by 4galaxy77

1 answer

It seems that command is part of AdmixTools (https://github.com/DReichLab/AdmixTools) which would come down to:

conda install -c bioconda admixtools

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written 4.1 years ago by ATpoint

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