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cindy.perscheid
cindy.perscheid
Reputation:
100
Joined:
9.0 years ago
Last seen:
5.0 years ago
Location:
Hasso Plattner Institute, Potsdam, Germany
Latest posts by user
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Comment: C: Normalize FPKM values for cross-sample comparisons?
written by cindy.perscheid cindy.perscheid
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1 reply
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Comment: C: Normalize FPKM values for cross-sample comparisons?
written by cindy.perscheid cindy.perscheid
1 vote
1 reply
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Comment: A: Normalize FPKM values for cross-sample comparisons?
written by cindy.perscheid cindy.perscheid
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Comment: A: Normalize FPKM values for cross-sample comparisons?
updated by Kevin Blighe Kevin Blighe • written by cindy.perscheid cindy.perscheid
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7 replies
4.3K views
Normalize FPKM values for cross-sample comparisons?
fpkm rna-seq normalization
written by cindy.perscheid cindy.perscheid
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Answer: A: TCGA MAF (mutation annotation format) to EIGENSOFT's smartpca via PLINK (or: how
written by cindy.perscheid cindy.perscheid
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Answer: A: Error running smartpca from eigensoft
written by cindy.perscheid cindy.perscheid
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1 reply
1.6K views
TCGA MAF (mutation annotation format) to EIGENSOFT's smartpca via PLINK (or: how to get SNP centiMorgan from TCGA MAFs)?
snp centimorgan covariate mutation annotation
written by cindy.perscheid cindy.perscheid
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1 reply
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Comment: A: Master dictionary of database file (2D dictionary) using Biopython, then specify
written by cindy.perscheid cindy.perscheid
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Answer: A: gTEX normalize counts by genotype
written by cindy.perscheid cindy.perscheid
1 vote
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Comment: A: Master dictionary of database file (2D dictionary) using Biopython, then specify
written by cindy.perscheid cindy.perscheid
3 votes
1 reply
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Answer: A: calculate RPKM from featureCounts result
written by cindy.perscheid cindy.perscheid
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Answer: A: Multiple TCGA expression datasets
written by cindy.perscheid cindy.perscheid
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1 reply
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Answer: A: Multiple TCGA expression datasets
written by cindy.perscheid cindy.perscheid
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2 replies
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Comment: C: GDC TCGA Metadata no project ID available?
written by cindy.perscheid cindy.perscheid
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1.5K views
Data set with both genetic variants and gene expressions
gene expression variants causal relationship gtex
updated by Biostar Biostar • written by cindy.perscheid cindy.perscheid
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2 replies
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Comment: A: GDC TCGA Metadata no project ID available?
written by cindy.perscheid cindy.perscheid
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Comment: C: Experience with dbGaP controlled access from outside the US?
written by cindy.perscheid cindy.perscheid
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Comment: C: Experience with dbGaP controlled access from outside the US?
written by cindy.perscheid cindy.perscheid
0 votes
1 reply
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Comment: C: GDC TCGA Metadata no project ID available?
written by cindy.perscheid cindy.perscheid
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