Also the latest version from Gencode:
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Dave Carlson
how to download all the human protein sequence at once
Hi everyone,
I want to download all human protein amminoacidic sequence at once to train a machine learning model. Do you have suggestions for database where I can download the whole sequence in batch?
Best,
Salvatore
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From UniProt as fasta file (one protein per gene) : https://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/reference_proteomes/Eukaryota/UP000005640/UP000005640_9606.fasta.gz
From RefSeq at NCBI as a fasta file: https://ftp.ncbi.nlm.nih.gov/refseq/H_sapiens/annotation/GRCh38_latest/refseq_identifiers/GRCh38_latest_protein.faa.gz
ok, thank you. sounds perfect
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