Single cell
Dear All,
I will soon progress to single cell experiment. I have experince doing bulk-RNA seq including QC, alignment, performing differentially gene expression analysis, enrichment etc. I am wondering whether any member could suggest the right source where I can get single cell sequencing file, alignment methods, and generate count matrix from aligned files to full scale analysis for practicing purposes. Much appreciated for your help.
Kind Regards,
Synat
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Strongly recommended by single cell experts here: https://bioconductor.org/books/release/OSCA/
You can find test data from 10x site.
Hi GenoMax,
Thank you very much for your guidance. Much appreciated. The tutorial looks great. I will check...
Regards,
synat