This is a test version of Biostars. For the public version, visit https://www.biostars.org.
GATK build

When I type ./gradlew bundle to build GATK, the error was shown in the screen

* What went wrong:
A problem occurred evaluating root project 'gatk'.
> Execution of "git lfs pull --include src/main/resources/large" failed with exit code: 1.  git-lfs is required to build GATK but may not be installed. See https://github.com/broadinstitute/gatk#building for information on how to build GATK.
gatk

Does anyone can help me?

why would you need to build gatk ?

otherwise, did you install git-lfs ?

Yes!I finished installing git-lfs, but when I run ./gradlew bundle, it would show that error. Or how can I use gatk to call SNP without build GATK?

0 answers

No answers yet.

Log in to answer this question.