Transcriptome Analysis
Hi, I am new at this. I recently sent my RNA for transcriptomic analysis and once I got the results back, I dont know how to interpret it. Could anyone please guide me to a software that is easy to use.
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Kevin Blighe
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harpreet.kaur •
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Your post includes no details at all. What is the experimental setup, which question do you want to answer, what format do you have the data in?
Hi sorry! our data is in fastaq format. The experimental setup is of salinity stress treatment. The question I have is how do I begin to do this. My background is in microbiology and this is the first time I am doing bioinformatics work. I do not even know how to begin. The company that did the RNA-seq for us suggested using IGV software but it is not user friendly and keeps showing error.
https://www.annualreviews.org/doi/abs/10.1146/annurev-biodatasci-072018-021255 and many threads here and on the web. It will require some effort to get started but there are plenty of online resources that can guide you.
Outsource the work to a consultant