calculate area under curve for profile plot (deepTools)
I created profile plots using deepTools. Now I want to compare samples. How to calculate area under curve for each sample?
• 1,586 views
•
link
updated
by
Devon Ryan
•
written
by
htchd •
•
written
by
htchd •
1 answer
You'll want to have a look at deepStats for things like this.
• 0 views
•
link
written
by
Devon Ryan
Log in to answer this question.
More posts like this
-
ATACSEQ normlization for bigwig files
written by RD •
-
Heatmap ChIP-seq average signal
written by Marco Pannone •
-
bamComparing ChIp-Seq samples with strange coverage between chipped and Input
written by Assa Yeroslaviz
-
Which RUVr batch corrected output is better to calculate TPM?
written by star
-
How to calculate fold change values from GSM data
written by teeteen •
-
finding AUC and AUCPR in gene regulatory network through ARACNE and CLR methods
written by modarzi
-
Identifying differential histone mark (H3k27me3 and H3k4me3) in treated and control sample
written by munaj86 •
-
plotting SNP data in normal and tumor tissues
written by Anu •
-
How to compare the similarity of a dataset against a larger dataset and plot a heat map?
written by nattzy94 •
-
Detect CNVs in single sample using cn.MOPS
written by win
