R Package For De Novo Assembly
Does anyone know any R package for de novo assembly? Thanks in advance......
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Michael Dondrup
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namratapatel183 •
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namratapatel183 •
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I think that doesn't exist, also, using R infrastructure wouldn't provide advantages for a developer, because the core code would be C or C++ anyway.
The system() function in R can be used to wrap an assembler command-line. This functionality, combined with an appropriate parser for the output could be used to create an R package that meets your needs.