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is there any way to filter NCBI datasets by sample type?

Hi,

I analyse micro array datasets to get gene expression data.

I want to filter NCBI datasets by sample type.

For example I want to get only tumor/cancer sample in GSE19826.

I look at all the samples one by one and select them manually.

Is there any simple way or tool to get it or I have to look manually?

enter image description here

gene gene expression r python
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updated by Pierre Lindenbaum Pierre Lindenbaum • written by tyasird • tyasird

1 answer

a simple XSLT generating a shell script from the Sample names:

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written by Pierre Lindenbaum Pierre Lindenbaum

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